| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_4133 |
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| Symbol | ribD |
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| ID | 7189168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH820 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011773 |
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| Strand | + |
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| Start bp | 3946559 |
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| End bp | 3947671 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643557544 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002453083 |
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| Protein GI | 218905249 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 138 |
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| Fosmid unclonability p-value | 0.889423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGATC AAGAATATAT GAGGATTGCC CTGCAATTAG CAGAAGGAAC ATGTGGGCAA
ACAAGTCCAA ATCCTATGGT TGGTGCTGTT GTTGTAAAAG ACGGAAACAT CGTCGGTATG
GGGGCTCATT TACGTGCTGG TGAAGAACAC GCAGAAGTTC ATGCTCTTCA TATGGCTGGT
GACAAAGCAA AAGGAGCCAC CGTGTATGTA ACCCTTGAAC CATGTAGCCA TTTTGGAAAA
ACACCACCTT GCTGTGAATT GCTCATCAAA AAAGAAGTCA AACGGGTTGT AATTGCTACT
CTTGATTGCA ATCCGCTCGT TTCTGGTAAT GGAAAAAGAA AATTAGAGGA AGCTGGCATC
GAAGTAACTA CCGGTGTTCT GGAAGCAGAA GCAGTTTTAT TAAATCGCTA CTTTTTTCAC
TACATGAAAA CGAAACGTCC ATTTGTAACA ATAAAAACAG CGATGAGCTT AGACGGAAAA
ACAGCAACTG TTACTGGTGA AAGTAAGTGG ATTACAGGTG AAAAAGCACG AGCTGATGTT
CACCAATACC GCCATACACA TGATGCGATT CTCGTTGGAG TGAATACAGT TATAGCTGAT
AATCCGCATT TAACAACAAG AATTCCTAAC GGGGGGCAAA ATCCTATACG AGTTATTTTA
GATACCCATT TACGAACGCC ACCATCTTCT CATGTCATAA CAGATTCTTT AGCACCGACA
TGGATTATAG TTGGTACGGA TGTAAATCAA GAGAAAATAG CTTCTTATGA ATCTAAAAAT
ATAGCTATAT TCCAAATGAA AACGAAGCAG ATTGAAATAC AGGATGTTTT ACACTTACTC
GGCGAAAAAC AAATTCTTTC TCTTTTCGTC GAAGGGGGGC AAACAGTTCA TGCAAGCTTC
TTACAAACAA AGTATTTCAA TGAAATTGTA ACTTATATAA GCCCAAAATT AATTGGTGGC
AGTAAGGCCC CTACTTTATT TGGCGGAAAT GGTTTTTCAA CATTACAAGA TGCGCTTTCC
TTGGAAATTC AAGAGATGAA ACAAATTGGT GATGATATAA AAATCGTTGC GCATGCCCGA
AACGAGGTGA CGAAATGTTT ACAGGAATTG TAG
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| Protein sequence | MTDQEYMRIA LQLAEGTCGQ TSPNPMVGAV VVKDGNIVGM GAHLRAGEEH AEVHALHMAG
DKAKGATVYV TLEPCSHFGK TPPCCELLIK KEVKRVVIAT LDCNPLVSGN GKRKLEEAGI
EVTTGVLEAE AVLLNRYFFH YMKTKRPFVT IKTAMSLDGK TATVTGESKW ITGEKARADV
HQYRHTHDAI LVGVNTVIAD NPHLTTRIPN GGQNPIRVIL DTHLRTPPSS HVITDSLAPT
WIIVGTDVNQ EKIASYESKN IAIFQMKTKQ IEIQDVLHLL GEKQILSLFV EGGQTVHASF
LQTKYFNEIV TYISPKLIGG SKAPTLFGGN GFSTLQDALS LEIQEMKQIG DDIKIVAHAR
NEVTKCLQEL
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