| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_3907 |
|---|
| Symbol | lspA |
|---|
| ID | 7190832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | - |
|---|
| Start bp | 3747003 |
|---|
| End bp | 3747461 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643557318 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_002452857 |
|---|
| Protein GI | 218905023 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 0.00000000548028 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATATATT ATGTAATAGC GTTATTTGTC ATTGCCATCG ATCAAATATC GAAATGGCTA
ATTGTAAAGA ACATGGAATT GGGTACGAGC ATTCCGATTA TCGATAATGT ATTATACATA
ACATCACATC GAAATAGAGG AGCTGCCTGG GGCATTTTAG AAAATAAAAT GTGGTTCTTC
TACATTATTA CAGTCGTTTT TGTAGTATTT ATCGTATTTT ATATGAAAAA ATATGCGAAA
ACAGACAAGC TTCTAGGAAT TTCATTAGGT CTAATTTTAG GCGGAGCAAT TGGCAATTTT
ATTGATCGTG TATTTAGACA AGAAGTAGTG GATTTCATTC ACGTGTATAT TTTCTCGTAC
AACTATCCAG TATTCAATAT AGCTGATTCA GCATTATGTA TTGGTGTTGT ATTAATTATT
ATTCAAACAT TATTAGAAGG CAAGAAAACA AAGGAGTAA
|
|---|
| Protein sequence | MIYYVIALFV IAIDQISKWL IVKNMELGTS IPIIDNVLYI TSHRNRGAAW GILENKMWFF
YIITVVFVVF IVFYMKKYAK TDKLLGISLG LILGGAIGNF IDRVFRQEVV DFIHVYIFSY
NYPVFNIADS ALCIGVVLII IQTLLEGKKT KE
|
|---|
| |