Gene BCAH820_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH820_3600 
Symbol 
ID7189816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH820 
KingdomBacteria 
Replicon accessionNC_011773 
Strand
Start bp3439186 
End bp3439719 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content32% 
IMG OID643557011 
ProductRNA polymerase sigma-70 factor, ECF subfamily 
Protein accessionYP_002452550 
Protein GI218904716 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value3.66826e-17 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAGTAA TCCCTTTATA TAAAATGTTG GTAAAAGAAG AAACAGATGT TTCCTTAGCG 
AAAAAAGGTG ATCATGAAGC TTTTATGACT CTTATACATA CAGAAAAAGT GAAGATGTAT
CGTATTGCAA AGGCTATGTT ACGTGATGAG ACAAATATAG AGGATGCGAT ACAAACAACA
ATTTTAAAAG CCTATGAAAA TATAAAAAAA TTAAAGAAGG AAGAGTTTTT TCAAACTTGG
TTAATTCGAA TTTTAATGAA TGAATGTAAC AACATTATTA GAACGTATAA AAAGGTAATT
GTGACAGAAG AGAATGATTA CAATGTGAGT GCGTGCGATC AGTATGAAGA TATAGATTTG
TGTAATGCGA TTCAATCGTT ACATGAAGAG TTAAGAGCTG TTACGGTGCT TTATTATTAT
GAAGATATGA ATCAAGAGAG TATAGCGAAG CTTTTAGAAA TACCAAAAGG AACAGTGAAA
TCGAGATTGT CACGTGCGAG GGAACAACTA CAGAAACGAT TAAAGATGGA ATAG
 
Protein sequence
MKVIPLYKML VKEETDVSLA KKGDHEAFMT LIHTEKVKMY RIAKAMLRDE TNIEDAIQTT 
ILKAYENIKK LKKEEFFQTW LIRILMNECN NIIRTYKKVI VTEENDYNVS ACDQYEDIDL
CNAIQSLHEE LRAVTVLYYY EDMNQESIAK LLEIPKGTVK SRLSRAREQL QKRLKME