| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_2548 |
|---|
| Symbol | |
|---|
| ID | 7187375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 2422586 |
|---|
| End bp | 2425072 |
|---|
| Gene Length | 2487 bp |
|---|
| Protein Length | 828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643555959 |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_002451498 |
|---|
| Protein GI | 218903664 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 2.19879e-34 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGATAGGGA ATTTTATATC AGCTTTTCAA GTACTTAATG TAGAATTACC AATTCAAAAT
TTTAATATCT CTGATGTGTT TTTGTTGTTT TTCTTATTCT TCTTTCTCTT TGCGTTCTTT
TATAAAATCA TGATGGAATG TAACAAATGG GAGAAAGCGT ATTTACTTTG TGATTTATGC
ATTGTTGTTA CTGCTATTTT TACATTAGAG TGGTACCTAT TTAATAAACC TTCTGCAAAT
ATCTTATTCT TTTCAATTGG AGATGTTTTT CTTTCATTTA TTTTTCCGAT TATAGATTTA
TTGCTTCTAT TACTTGGAGT TACACTAATC TTTCGACCTG CTATTTTCAA TGCAAAAAGT
AAATTGTTTA TTTTTATCCT AGTATTAACT GGATTTGCTA TTACGGACTA CTTATATTTT
TACTTACAAG ATGATTTGTC AGATCGTTCA GTTATATTAT TAAGGTGTTT GTATAGAGTT
TTTCTATTAT TTATCGCTAT TGCTGCGACT ATCCCAAGGA GTGTATCTTC TAAAAGAAAT
TATTTTATTA TTAATCCGAC ATTTGGAAAG AAACTTCTTG TCATATTCCC TTATCTTGCA
GTTGCAATCT TAATTGGTTT TACTTTGAAA GAGCAAACTT CTTCATCTAC ACTGATTACG
GGAAATTGTA TTGCCTTTGT ATTTGTACTG ATTCGTCATA TAATTGTACG CATGCAAAAC
AAAGATTTAA CCGAAACATT AAAAGTGTTT AATAATCAAT TAGAGCAAAA AGTATTTCAA
AGAACAGCAG ATTTAATAAA AAAATCTAAT GATTTGGTAA AAAATCAAGA GAGGTTTAAG
TCCTTATATG AGTATCATCC AGACCCTATA TTAACTATTG ATCCAAATGG TACCGTTTTA
AATATAAACC AGTCTGGAAG TATATTATTA GGGAAGGACA GTGCTGCATT AATAGGAAAA
GAGTGCTTCT CTATTTTTTT AGATGAAGAT AAACCTGAAT TGGAAGCAGC CCTAAAGATG
GGGAAACGAT GTAGTTCGTC TTCTTTACAG TTACGTGTGA AACATAATAA TGAGAAGGAT
ATATATTTTT GGTATGTCAC TATTGTTCCT ATTATGATAG AAGGACAAAC TTTTGGGAGT
TATGTAATGG TAAAAGACAT TACGAAAATG AAGCAACAAC AAGATAAGAT AAACTATCTA
GCATTCCATG ATACAGTGAC GGAGATTGGA AATCGAATAT TCTTCCAACA AGAATTAGAA
AAATCCATTG AACGTGCACA AAAAACGCAG GGTGAATTTG GACTCTTGTA TATAGATTTA
AATCGTTTTA AGACCATTAA TGATACAATG GGACATTCAA TTGGTGATAG TGTTTTAAAA
GAAGTTGCTA AACGTTTTAG GACATGTCTG TCACCGTCTA TTCCTCTGGC TAGAATAGGG
GGAGATGAGT TTGCAGTCTT AGTCCATAAC CACACAGAAC AACAGCTATT GGATTTATGT
GAAAATCTGT TTCGTATAAC TGAAAAACCA TTTGTAGTCA ATCAGCATAG TTTTTACTTA
TCTCTTAGTA TAGGAATAGC AGTGTATCCG TTTGGAGGAA TAAACACTAC TACACTTTTA
CAACATGCTG ATATCGCCAT GTATAGCGCA AAGGAAAAAG GTAACAATGC TGTTTGTATG
TACGACGAGA CATTATCTCA AAAAATAACA AGACGATTAC AATTAGAACA GGATTTACCG
AATGCAATTG AAAATAATGA GTTGTTTTTA TTATATCAAC CACAAGTTGA TAGTAAGGCA
GGTAAGGTTA TTGGTGCAGA GGCTTTAATA CGTTGGCAAC ATCCAGAGCT TGGGCTAATT
TCACCTTTTG AGTTTATACC TATCGCGGAA GAAACATCGC AGATTATTTC AATTGGGAAA
TGGACGTTAC AGGAAGCGTG TCGGCAACTG AAAGAATGGG ATTCTGCAGG CTATTCAAAT
TTAAAGATGG GGATAAATTT ATCAGCTATA GAGTTTGAAC AGAAGGGCTT TGTTCAAACA
GTCATATCTA TTATAGAAGA AGTAGGGGTA CCAGCTAACT CGATTGATTT GGAATTAACA
GAGCGTATTG CCATGGTAGA TGAAAAAGAA ACTTTATCGA AGTTAAAAGC ATTAAAATCA
TATGGTGTAC ATTTATCAAT TGATGATTTT GGTACAGGCT ATTCTTCATT AGCGTATTTA
CCTTTGTATC CAATTGATAC TTTGAAAATT CCAAGAGAAT TTGTGAATAG GATTGGAACT
TCAAATGATG GAGATGAAAT TATACAAACT ATTATTTCGT TAGCCCATAC TTTAAATATG
AAAGTAATAG CAGAAGGGGT AGAAACGAAG GAGCAATTAA CAGTGTTACA ACAAAATGCA
TGTTATCTAA TTCAAGGGTA TTACTACAGT AAGCCTGTAA ATGAAGATGA ATTTATTAAT
TTTTTAAATA CGACACATAA CAAATAA
|
|---|
| Protein sequence | MIGNFISAFQ VLNVELPIQN FNISDVFLLF FLFFFLFAFF YKIMMECNKW EKAYLLCDLC
IVVTAIFTLE WYLFNKPSAN ILFFSIGDVF LSFIFPIIDL LLLLLGVTLI FRPAIFNAKS
KLFIFILVLT GFAITDYLYF YLQDDLSDRS VILLRCLYRV FLLFIAIAAT IPRSVSSKRN
YFIINPTFGK KLLVIFPYLA VAILIGFTLK EQTSSSTLIT GNCIAFVFVL IRHIIVRMQN
KDLTETLKVF NNQLEQKVFQ RTADLIKKSN DLVKNQERFK SLYEYHPDPI LTIDPNGTVL
NINQSGSILL GKDSAALIGK ECFSIFLDED KPELEAALKM GKRCSSSSLQ LRVKHNNEKD
IYFWYVTIVP IMIEGQTFGS YVMVKDITKM KQQQDKINYL AFHDTVTEIG NRIFFQQELE
KSIERAQKTQ GEFGLLYIDL NRFKTINDTM GHSIGDSVLK EVAKRFRTCL SPSIPLARIG
GDEFAVLVHN HTEQQLLDLC ENLFRITEKP FVVNQHSFYL SLSIGIAVYP FGGINTTTLL
QHADIAMYSA KEKGNNAVCM YDETLSQKIT RRLQLEQDLP NAIENNELFL LYQPQVDSKA
GKVIGAEALI RWQHPELGLI SPFEFIPIAE ETSQIISIGK WTLQEACRQL KEWDSAGYSN
LKMGINLSAI EFEQKGFVQT VISIIEEVGV PANSIDLELT ERIAMVDEKE TLSKLKALKS
YGVHLSIDDF GTGYSSLAYL PLYPIDTLKI PREFVNRIGT SNDGDEIIQT IISLAHTLNM
KVIAEGVETK EQLTVLQQNA CYLIQGYYYS KPVNEDEFIN FLNTTHNK
|
|---|
| |