| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_2403 |
|---|
| Symbol | |
|---|
| ID | 7188777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 2287866 |
|---|
| End bp | 2288573 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643555814 |
|---|
| Product | RNA pseudouridine synthase family protein |
|---|
| Protein accession | YP_002451353 |
|---|
| Protein GI | 218903519 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 177 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTATCA ATAAATTTAT TAGTGAAGCT GGAAAAGCGT CTCGACGTGG AGCAGATAAA
CTAATTAATG AGAGAAGAGT AATTATTAAC GGTAAGGTTG CAAAAATTGG TGACCAAGTG
AATCCAGGTG ATGATGTACG CGTAAATGGA GAGCAACTTC GCATTGCTCG AGATCACGTA
TATATCGCTT TAAATAAACC AGTAGGTATT ACATGTACAA GTGAAAAATC GGTAAAAGGT
AATATTATCG ATCTAGTGAA TCATCCATTA CGAATTAGTC ACATTGGACG TCTTGATAAA
GACTCAGACG GTTTAATTTT GTTAACGAAT GATGGTGATA TCGTTAATGA AATTTTACGT
GCTGAAAACA AACATGAGAA AGAATATATC GTTTCAGTAG ATAAGCCAAT TACACCTGAT
TTCTTAGAAA AAATGGCAGC TGGTGTGAAA ATTTTAGGAA CGAAAACACT TCCATGTGAG
ATCACACAGT TATCAAAATA TGAGTTTAAA ATTATTTTAA CACAAGGATT GAATCGTCAA
ATTCGCCGTA TGTGTGAAGC TTTAGGGTAT CAAGTATATA CGTTAAAACG TACGAGAATT
ATGAATATTG AATTGAATAA TTTACCAGTT GGACAGTGGA GAGATTTAAC GAAGAAAGAG
AAAAGACGTC TATTTTCAGA CTTAAATTAC GAACCACAAG ATTGGTAA
|
|---|
| Protein sequence | MRINKFISEA GKASRRGADK LINERRVIIN GKVAKIGDQV NPGDDVRVNG EQLRIARDHV
YIALNKPVGI TCTSEKSVKG NIIDLVNHPL RISHIGRLDK DSDGLILLTN DGDIVNEILR
AENKHEKEYI VSVDKPITPD FLEKMAAGVK ILGTKTLPCE ITQLSKYEFK IILTQGLNRQ
IRRMCEALGY QVYTLKRTRI MNIELNNLPV GQWRDLTKKE KRRLFSDLNY EPQDW
|
|---|
| |