| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_1959 |
|---|
| Symbol | ldh |
|---|
| ID | 7191699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | - |
|---|
| Start bp | 1866057 |
|---|
| End bp | 1867001 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643555371 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_002450910 |
|---|
| Protein GI | 218903076 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 0.000000000000164106 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GTATTAACCG TGTTGTATTA GTAGGAACAG GAGCAGTTGG ATGTAGTTAT
GCTTACTGCA TGATTAACCA AGCCGTAGCT GAAGAATTTG TTTTAGTCGA TGTAAATGAG
GCAAAAGCTG AAGGGGAAGC AATGGATTTA AGTCATGCTG TTCCATTCGC ACCAGCTCCA
ACTAGAGTAT GGAAAGGCAG CTACGAAGAT TGTAAAGATG CTGACCTTGT AGTTATTACA
GCTGGATTAC CACAAAAGCC AGGCGAAACA CGTTTAGATT TAGTTGAGAA AAACGCTAAA
ATCTTCAAAC AAATCGTTCG CAGTATTATG GATAGCGGAT TTGATGGCAT CTTCTTAATC
GCAACAAACC CTGTAGATAT TTTAACTTAC GTAACTTGGA AAGAATCTGG TTTACCGAAA
GAACGCGTAA TTGGTTCTGG TACAACACTT GATTCTGCTC GTTTCCGCTA TATGTTAGGT
GAGTACTTCA ATATTGGTCC ACACAACATT CATGCTTATA TTATCGGCGA ACATGGTGAT
ACGGAACTTC CTGTTTGGAG TCACGTATCA GTTGGTATTC AAAAATTACA AACACTGCTT
GAAAAAGACA ATACGTATAA TCAAGAAGAT TTAGACAAAA TCTTCATAAA CGTTCGTGAT
GCAGCCTACC ATATTATTGA ACGAAAAGGG GCAACATACT ATGGTATTGG TATGTCACTT
CTACGCGTTA CTAAGGCAAT TTTAAACGAC GAAAATAGTG TATTAACTGT TTCGGCATAT
TTAGAAGGGC AATACGGTCA AAAAGATGTG TATATCGGTG TACCTGCTGT TTTAAATCGC
GGCGGTGTTC GTGAAATTTT AGAAGTAGAA TTAAGTGAAG ACGAAGAATT AAAATTCGAT
CACTCAGTTC AAGTGTTGAA AGAAACAATG GCTCCTGTTC TTTAA
|
|---|
| Protein sequence | MKKGINRVVL VGTGAVGCSY AYCMINQAVA EEFVLVDVNE AKAEGEAMDL SHAVPFAPAP
TRVWKGSYED CKDADLVVIT AGLPQKPGET RLDLVEKNAK IFKQIVRSIM DSGFDGIFLI
ATNPVDILTY VTWKESGLPK ERVIGSGTTL DSARFRYMLG EYFNIGPHNI HAYIIGEHGD
TELPVWSHVS VGIQKLQTLL EKDNTYNQED LDKIFINVRD AAYHIIERKG ATYYGIGMSL
LRVTKAILND ENSVLTVSAY LEGQYGQKDV YIGVPAVLNR GGVREILEVE LSEDEELKFD
HSVQVLKETM APVL
|
|---|
| |