Gene BCAH820_0114 details

Gene Information

• Locus tag: BCAH820_0114
• Symbol: rpoB
• ID: 7187465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH820
• Kingdom: Bacteria
• Replicon accession: NC_011773
• Strand: +
• Start bp: 108549
• End bp: 111941
• Gene Length: 3393 bp
• Protein Length: 1130 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643553519
• Product: DNA-directed RNA polymerase subunit beta
• Protein accession: YP_002449140
• Protein GI: 218901306
• COG category: [K] Transcription
• COG ID: [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit
• TIGRFAM ID: [TIGR02013] DNA-directed RNA polymerase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 0
• Fosmid unclonability p-value: 3.65239e-57
• Fosmid Hitchhiker: No
• Fosmid clonability: unclonable

Sequence

Gene sequence

ATGTTCCAAG ACATTTCTCC GATTGAAGAC TTTACGGGAA ATCTATCGCT TGAATTTATC 
GACTACAGCT TAGGTGAACC TAAATACTCT GTAGACGAAT GCAAAGAGCG TGATGTGACG 
TATGCAGCAC CACTTCGTGT AAAAGTGCGT CTAATCAACA AGGAAACTGG TGAAGTAAAA 
GAACAAGATG TGTTCATGGG AGATTTCCCA CTCATGACAG AGACTGGAAC ATTCGTAATT 
AACGGTGCAG AACGTGTTAT CGTTTCCCAG TTAGTTCGCT CTCCAAGCGT ATACTATAGT 
GGCAAAGTGG ATAAAAACGG AAAACGTGGT TTTACTGCTA CTGTAATTCC AAACCGCGGA 
GCTTGGTTAG AGTATGAGAC AGATGCTAAG GATGTTGTAT ATGTGCGTAT TGACCGTACG 
CGTAAACTTC CTGTAACTGT TTTGTTACGC GCATTAGGGT TTGGCTCTGA TCAAGAAATC 
ACCGAGCTTT TAGGTGATAA CGAATACTTA AGCAACACAT TAGAAAAAGA CAACACAGAT 
AGCACAGAAA AAGCATTGCT TGAAATTTAT GAGCGTCTAC GTCCTGGTGA ACCACCAACA 
GTAGAAAATG CTAAGAGCTT ACTTGTGTCT CGTTTCTTCG ATCCAAAGCG CTACGATTTA 
GCAAATGTAG GTCGCTACAA GATCAACAAG AAGTTACACA TTAAAAACAG ATTGTTTAAT 
CAACGTTTAG CTGAAACATT AGTGGATCCA GAAACTGGTG AAATTTTAGC GGCAGAAGGA 
ACAATCTTAG ATCGTCGTAC ACTTGATCGC ATTTTACCTT ACTTAGAGAA AAACATTGGA 
TTCAAAACAG CGAAACCAAT GGGTGGAGTG GTAGAAGGCG ATGTTGAGCT GCAATCTATT 
AAGATTTATG CTCCTGAGTC AGAAGGCGAA CGTGTAATTA ATGTAATTGG TAATGCAAAC 
ATTACTCGTG ATGTAAAACA CATCACACCA GGTGATATCC TTGCTTCTAT CAGTTACTTC 
TTCAACCTAC TATACAAAGT AGGGGATACA GATGATATCG ACCACTTAGG AAACCGTCGT 
CTGCGTTCTG TTGGAGAACT ATTACAAAAT CAATTCCGTA TCGGTCTTTC TCGTATGGAA 
CGTGTTGTTC GTGAGAGAAT GTCGATCCAA GATACAAATG CAATTACACC ACAGGCATTA 
ATTAATATTC GTCCTGTTAT TGCATCTATT AAAGAGTTCT TCGGAAGTTC TCAGTTATCT 
CAGTTCATGG ACCAAACAAA CCCATTAGCA GAGTTAACTC ACAAACGAAG ACTATCTGCA 
TTAGGACCTG GTGGTTTAAC GCGTGAGCGC GCAGGCTTTG AAGTACGTGA CGTTCACTAC 
TCTCACTATG GTCGTATGTG TCCGATTGAA ACACCAGAGG GACCAAACAT CGGTTTGATT 
AACTCATTAT CTTCATTCGC GAAAGTAAAT GAGTTTGGTT TCATTGAAAC ACCATACCGT 
CGTGTTGACC CAGAAACTGG TCTTGTAACA GGGCATGTTG ATTATTTAAC AGCAGATGAA 
GAAGATAATT ATGTTGTAGC CCAAGCGAAT ATGAAATTAT CTGAAGAAGG AGAATTCCTT 
GATGAAGATA TCGTAGCTCG TTTCCGTGGT GAAAACATTG TCACAAATAA AGAACGCATC 
GACTACATGG ATGTATCACC AAAACAAGTA GTGTCGGCAG CGACAGCTTG TATTCCGTTC 
TTAGAAAACG ATGACTCTAA CCGCGCACTT ATGGGAGCGA ACATGCAACG TCAGGCGGTT 
CCGTTAATGA ATCCGGAATC ACCGATTGTA GGTACAGGTA TGGAGTACGT ATCAGCAAAA 
GACTCAGGTG CTGCAGTAAT CTGTAAACAC CCTGGTATTG TTGAGCGCGT AGAAGCACGT 
GAAGTTTGGG TACGTCGCTA TGTAGAAGTT GACGGTCAAA CAGTAAAAGG CGATTTAGAT 
CGCTACAAAA TGCAAAAATT CATTCGTTCT AACCAAGGAA CTTGCTACAA CCAACGTCCA 
ATCGTAAGTG TTGGAAATGA AGTTGTAAAA GGTGAAATCC TTGCGGATGG TCCTTCTATG 
GAATTAGGTG AACTAGCACT TGGACGTAAC GTGCTTGTTG GCTTCATGAC TTGGGACGGT 
TATAACTACG AGGATGCGAT CATTATGAGT GAGCGCCTTG TAAAAGATGA TGTGTACACT 
TCTATTCATA TTGAAGAATA TGAGTCAGAA GCTCGTGATA CGAAGCTTGG ACCAGAAGAA 
ATTACACGTG ACATTCCAAA CGTTGGGGAA GATGCATTAC GCAACCTTGA CGAGCGCGGT 
ATCATTCGCG TTGGTGCGGA AGTAAAAGAT GGAGATTTAC TTGTTGGTAA AGTAACGCCT 
AAAGGTGTAA CAGAATTAAC AGCTGAAGAA CGTCTATTAC ATGCTATCTT TGGAGAAAAA 
GCGCGTGAAG TACGTGATAC ATCACTACGT GTACCACACG GTGGTGGCGG TATTATCTTA 
GACGTAAAAG TATTCAACCG TGAAGATGGC GATGAATTGC CACCAGGCGT GAATCAACTT 
GTACGTGCAT ATATCGTTCA AAAACGTAAA ATTTCTGAAG GTGACAAGAT GGCCGGACGT 
CACGGTAACA AAGGTGTTAT CTCTCGTATT TTACCAGAAG AAGATATGCC TTACTTACCA 
GACGGTACGC CAATCGATAT CATGTTAAAC CCATTAGGGG TACCATCTCG TATGAATATC 
GGTCAGGTAT TAGAGCTTCA TCTTGGTATG GCAGCAAGAT ACCTTGGTAT TCACATTGCA 
ACACCAGTAT TCGATGGTGC TCGTGAGGAA GATGTTTGGG GCACAATTGA AGAAGCTGGT 
ATGGCAAATG ACGCGAAAAC AATCCTGTAT GACGGACGTA CTGGTGAACC ATTCGATAAC 
CGTGTATCTG TTGGTGTCAT GTATATGATC AAACTTGCGC ACATGGTTGA CGATAAACTT 
CATGCTCGTT CTACTGGACC ATACTCACTT GTAACGCAGC AGCCTCTTGG AGGTAAAGCT 
CAGTTCGGTG GACAGCGTTT CGGTGAGATG GAGGTTTGGG CACTTGAAGC TTACGGTGCT 
GCTTATACTC TTCAAGAAAT CTTAACAGTG AAGTCTGATG ATGTTGTTGG ACGTGTTAAG 
ACGTATGAAG CAATTGTTAA AGGCGAAAAT GTTCCAGAAC CAGGCGTTCC TGAATCATTC 
AAAGTATTGA TTAAAGAGCT GCAAAGTTTA GGTATGGACG TTAAAATGAT GTCTAGCGAC 
GATACAGAAA TTGAAATGCG TGATACGGAA GATGACGATG ATCATCAATC AGCAGATAAA 
TTGAATGTCG AAGTTGAGAC AACTAAGGAA TAA 

 

Protein sequence

MFQDISPIED FTGNLSLEFI DYSLGEPKYS VDECKERDVT YAAPLRVKVR LINKETGEVK 
EQDVFMGDFP LMTETGTFVI NGAERVIVSQ LVRSPSVYYS GKVDKNGKRG FTATVIPNRG 
AWLEYETDAK DVVYVRIDRT RKLPVTVLLR ALGFGSDQEI TELLGDNEYL SNTLEKDNTD 
STEKALLEIY ERLRPGEPPT VENAKSLLVS RFFDPKRYDL ANVGRYKINK KLHIKNRLFN 
QRLAETLVDP ETGEILAAEG TILDRRTLDR ILPYLEKNIG FKTAKPMGGV VEGDVELQSI 
KIYAPESEGE RVINVIGNAN ITRDVKHITP GDILASISYF FNLLYKVGDT DDIDHLGNRR 
LRSVGELLQN QFRIGLSRME RVVRERMSIQ DTNAITPQAL INIRPVIASI KEFFGSSQLS 
QFMDQTNPLA ELTHKRRLSA LGPGGLTRER AGFEVRDVHY SHYGRMCPIE TPEGPNIGLI 
NSLSSFAKVN EFGFIETPYR RVDPETGLVT GHVDYLTADE EDNYVVAQAN MKLSEEGEFL 
DEDIVARFRG ENIVTNKERI DYMDVSPKQV VSAATACIPF LENDDSNRAL MGANMQRQAV 
PLMNPESPIV GTGMEYVSAK DSGAAVICKH PGIVERVEAR EVWVRRYVEV DGQTVKGDLD 
RYKMQKFIRS NQGTCYNQRP IVSVGNEVVK GEILADGPSM ELGELALGRN VLVGFMTWDG 
YNYEDAIIMS ERLVKDDVYT SIHIEEYESE ARDTKLGPEE ITRDIPNVGE DALRNLDERG 
IIRVGAEVKD GDLLVGKVTP KGVTELTAEE RLLHAIFGEK AREVRDTSLR VPHGGGGIIL 
DVKVFNREDG DELPPGVNQL VRAYIVQKRK ISEGDKMAGR HGNKGVISRI LPEEDMPYLP 
DGTPIDIMLN PLGVPSRMNI GQVLELHLGM AARYLGIHIA TPVFDGAREE DVWGTIEEAG 
MANDAKTILY DGRTGEPFDN RVSVGVMYMI KLAHMVDDKL HARSTGPYSL VTQQPLGGKA 
QFGGQRFGEM EVWALEAYGA AYTLQEILTV KSDDVVGRVK TYEAIVKGEN VPEPGVPESF 
KVLIKELQSL GMDVKMMSSD DTEIEMRDTE DDDDHQSADK LNVEVETTKE