Gene BCG9842_B5466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B5466 
Symbol 
ID7185823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp5242770 
End bp5243297 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content31% 
IMG OID643553259 
ProductRNA polymerase sigma factor 
Protein accessionYP_002448900 
Protein GI218900489 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.589773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA AGGTAGAAGA ATTAATTGAT ATATATAAGC AGCAAATATA TTCCTTATGC 
TATAAGTTAG CGAAAACGAA AGAAGATGCG GAAGATATTT TTCAAGAGAC GTGGATAAAG
GTTTTTTCAT CAAGGCATCA ACTTTCCTAT GTGGATAATT ATAAAAAATG GATTGCTACA
ATTTGTGTTC GTACGTTTTA TGATTTTTAT CGTAAGAAAA AAAGGTGGAA AGATCGAATA
TTGGATTTGT TTCATAAAGA AGATGGTGGA GAAATAGATT TCGCAGATGA AGTAAATATA
TCAGAAGAAT GTATTCAAAA AGTGGAAGCG GAAATGATAC GGGAAGTTAT ACAGTTATTG
AATGAAAAGT ATAAAACTGT GCTCGTACTC TACTATTATG AACAATATTC TTATAAAGAA
ATGAGTGAAA TATTAAATAT ACCGATTGGT ACAGTGAAAT ACCGCCTTAA TTATGCGAAG
AAGCAAATTC GAGAACATTT GGAGGGGTTC GTTTATGACG GAAGATAA
 
Protein sequence
MEEKVEELID IYKQQIYSLC YKLAKTKEDA EDIFQETWIK VFSSRHQLSY VDNYKKWIAT 
ICVRTFYDFY RKKKRWKDRI LDLFHKEDGG EIDFADEVNI SEECIQKVEA EMIREVIQLL
NEKYKTVLVL YYYEQYSYKE MSEILNIPIG TVKYRLNYAK KQIREHLEGF VYDGR