Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B5458 |
Symbol | speE |
ID | 7184953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | - |
Start bp | 5249872 |
End bp | 5250699 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643553267 |
Product | spermidine synthase |
Protein accession | YP_002448908 |
Protein GI | 218900497 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTAT GGTTCACTGA AAAACAAACA AAACATTTTG GGATTACGGC GCGTATTAAC CGCACATTAC ATACGGAGCA AACAGAATTC CAGAAACTTG ATATGGTTGA AACGGAAGAG TTCGGAAACA TGCTTATTTT AGACGGCATG GTTATGACAA CAGAAAAGGA CGAGTTCGTT TATCACGAAA TGGTAGCGCA CGTACCTTTA TTTACACATC CAAACCCTGA AAACGTATTA GTTGTTGGCG GCGGCGATGG CGGTGTTATT CGCGAAGTGT TAAAACACCC AAGTGTAAAG AAAGCAACTC TTGTTGAAAT CGATGGAAAA GTAATTGAGT ACTCTAAACA ATACTTACCA TCAATTGCAG GCGCATTAGA TAATGAGCGT GTAGAAGTAA AAGTAGGAGA CGGTTTCCTA CACATCGCAG AAAGCGAAAA TGAATACGAC GTAATTATGG TAGATTCTAC TGAGCCAGTA GGCCCAGCAG TAAACTTATT TACGAAAGGT TTCTACGCTG GAATCTCTAA AGCGTTAAAA GAAGATGGTA TTTTCGTTGC ACAAACGGAC AACCCTTGGT TCACACCAGA ACTAATTACA ACTGTGTTTA AAGACGTAAA AGAGATTTTC CCAATTACTC GTTTATACAC AGCGAACATC CCAACTTACC CAAGTGGTCT TTGGACGTTC ACAATTGGAT CTAAAAAACA TGATCCATTA GAAGTAAGTG AAGAGCGTTT CCACGAAATC GAAACGAAAT ACTACACAAA AGAATTACAC AATGCAGCAT TCGCATTACC GAAATTTGTT GGCGATTTAA TTAAGTAA
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Protein sequence | MELWFTEKQT KHFGITARIN RTLHTEQTEF QKLDMVETEE FGNMLILDGM VMTTEKDEFV YHEMVAHVPL FTHPNPENVL VVGGGDGGVI REVLKHPSVK KATLVEIDGK VIEYSKQYLP SIAGALDNER VEVKVGDGFL HIAESENEYD VIMVDSTEPV GPAVNLFTKG FYAGISKALK EDGIFVAQTD NPWFTPELIT TVFKDVKEIF PITRLYTANI PTYPSGLWTF TIGSKKHDPL EVSEERFHEI ETKYYTKELH NAAFALPKFV GDLIK
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