| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B5258 |
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| Symbol | mfd |
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| ID | 7186206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus G9842 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011772 |
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| Strand | + |
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| Start bp | 54253 |
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| End bp | 57783 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643547839 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002443600 |
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| Protein GI | 218895189 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 112 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGTT TATTAGAGCA ATTTTATAAA AATAAAGAGA TACAATCAGT TATTAATGGA
TTAGAAGATG GGTTAAAGGA ACAACTTATA TCAGGGATGG CAACGTCTTC TCGTTCATTA
TTAATGGCGG CTTTATATAA AAAAACAAAA AAATCACAAT TAATCGTGAC ACATAACTTA
TACCAAGCGC AAAAAGTACA TGAAGATTTA GTGGCGTTAC TTGGTGAAAA AGATGTGTGG
CTATATCCAG TGAATGAACT TATAGCATCG GAAATTGGGG TTGCAAGTCC AGAATTGAAG
GCGCAACGTA TAGAAGTGTT AAATCGCTTG GCTGCTGGAG AGAATGGAAT CATTGTAGCT
CCAGTGGCAG GATTGCGTAG ATTTTTACCA ATAAAAGAAT TGTGGAAGCA AAAGCAAGTT
GAAATCAATC TAGGGCAAGA GATTGATTTA GATGCGCTCT TGCATACTTT ACATCATATT
GGCTATGAAC GTAAGTCGAT GGTAGAAGCT CCAGGGGAGT TCAGTTTGCG CGGGGGAATA
TTAGATATTT ATCCTTTAAC TGAAGAACTA CCATTTCGTA TTGAATTCTT CGATACAGAA
GTCGATTCTA TTCGATTATT TGATGTGGAT GAACAGCGTT CTCAAGGAAA AAAAGAAAGC
GTTAAGTTTG GTCCGGCAAC AGAGTTTTTA TTTTCACAGG AAGAATTAAA ATCAGGAATT
CAGCATCTTG AAGAAGGTTT GACTAAGACG ATGCAAAAAC TTTCTGATGA TAAACTAAAG
ACTACAGTAC TTGAGACGGT AAGTCATGAA ATTGAGATGT TGAAAAACGG GCAAAGTATA
GAACAGATGT TTAAATACTT ATCTATTTTC TATAAAGAAC CTGCTAGTCT GATAGATTAT
TTACCAGAAG ACGGTGTTGT AATTTTAGAT GAGATTTCCC GTATTCAAGA AACAGCATCA
CATCTGGAAA CAGAAGAGGC GGAATGGTAT ATATCACTTC TTGGTGAAGG AACAATTATT
CAAGATTTAT CTTTCTCTCA CGCATTCGAG GGATTTCTTC ATCATAAAAA AAGAAATTTT
GTATATTTAA CGTTATTCTT GCGTCATATT GCACACACAC ATCCGCAAAA TATTGTGAAT
GTAACATGTA AAACAATGCA AGATTTCCAT GGACAGATGA ATTTGTTAAA AACAGAAATT
GATAGATGGA ATGAAGGGCA TTTTACGACT GTTGTACTTG GAACAGATGA TGAACGTGTG
AAAAAATTAC AACATATTTT AAGTGATTAT GATATTGAGG CAGATATTGT GGAAGGTACA
GATATCTTAT TGTCTGGAAG GTTACAAATT GCTGTAGGTG ATTTACATGC AGGATTTGAA
ATGCCGATGC AAAAGCTTGT TGTCATTACT GAAAAGGAGC TTTTTCATAA GAAAGTTAAA
AAATCACAAC GTAAACAAAA GTTATCGAAT GCTGAACGTA TTAAAAGTTA TTCGGAATTA
AAAGTTGGAG ATTATGTAGT TCATGTAAAT CATGGTATAG GTAAATTTTT AGGTATTGAG
ACATTAGAGA TTAATGGTGT TCATAAAGAT TATTTAAATA TTAAATATCA AGGTAATGAT
AAGTTATACG TTCCAATTGA ACAAATTGAT CAAGTCCAAA AATATGTAGG GTCTGAAGGT
AAGGATCCAA AAGTTTACAA ATTAGGTGGT AATGATTGGA AGAAGGTTAA AACGAAAGTT
GAAAAATCTG TACAAGACAT TGCGGATGAC CTAATTAAAC TATATGCTGA ACGCGAAGCT
TCAAAAGGCT ATGCATATAC GCCAGATACA GCAGAACAAC AAGAGTTCGA ATCATCTTTC
CCATATCAAG AGACAGAGGA TCAGTTACGT TCTATTGACG AGATTAAAAA AGATATGGAA
CGCGGACGCC CGATGGATAG GCTCCTTTGT GGTGATGTAG GGTATGGAAA GACTGAAGTG
GCTATTCGTG CGGCATTTAA AGCAATTATG GATGAAAAAC AAGTTGCAAT TTTAGTACCG
ACAACGATTC TTGCGCAGCA ACACTATGAA ACAATTCGAG AGCGTTTTCA AGATTATCCA
ATCAATATAG GATTATTAAG TAGATTCCGT ACGAGAAAAC AACAAAATGA AACGATTAAG
GGTTTAAAGG ATGGCACAAT AGATATTGTA ATCGGAACAC ATCGTATTTT ATCTAAAGAT
GTTACTTATA AAGATTTAGG GCTTCTTATT ATTGATGAAG AACAAAGATT TGGTGTGACG
CATAAAGAGA AAATTAAACA ATTGAAGGCG AATGTTGACG TATTAACATT AACGGCAACT
CCGATTCCAC GGACGCTTCA TATGTCTATG CTTGGTGTGC GCGACTTATC TGTTATTGAG
ACACCGCCAG AAAATCGTTT CCCAGTCCAA ACGTATGTAG TAGAGTATAA TCCAGCATTA
ATGCGAGAGG CGATAGAGCG AGAGCTTGCA AGAGGCGGTC AAATTTACTT CCTATATAAC
CGTGTAGAGG ATATTGAAAG AAAAGCAGAT GAAATTTCGA TGTTAGTTCC AGATGCCCGT
GTAACATACG CACATGGGAA AATGAACGAA AGTGAATTAG AGTCTGTTAT GCTATCATTT
TTAGAAGGAC AGCATGATGT TCTTGTAAGT ACAACAATTA TTGAGACGGG TGTAGATATT
CCGAATGTAA ATACGTTAAT TGTATTTGAT GCAGATCGTA TGGGATTATC ACAGTTGTAT
CAGCTTCGTG GGCGTGTTGG ACGTTCTAAT CGTGTTGCAT ATGCATACTT TGCCTATAAA
CGTGACAAAG TGCTGTCAGA GGTTGCAGAG AAGCGTCTGC AAGCAATTAA AGAGTTCACG
GAACTTGGAT CTGGTTTCAA AATTGCGATG AGAGATTTAT CTATTCGTGG AGCAGGTAAT
TTGTTAGGGG CAGAGCAGCA TGGATTTATT GATTCTGTCG GATTTGATCT ATATTCTCAA
ATGTTAAAAG ATGCAATTGA ACAGCGTAGA GGAACAGATG GGGCTGAAAA TACAGTTAAT
GTTGAAATTG ACTTAGAGGT AGATGCATAC TTACCAGATG CTTATATTTC AGATAGTAAG
CAAAAAATTA TGATGTATAA ACAATTTAGA GGTGTTTCTG CAATTGAGGA TATTGAAGAA
TTGCAGGAAG AAATGATCGA TAGATTCGGT GATTATCCAC AAGAAGTCGG TTATTTATTA
CAAATTGCAA ATATTAAAGT GTTGGCAATG AAAGAACAAA TTGAGTTAAT TAAACAGAAT
AAATTTGAAG TAACATTCCT GTTTTCTGAA CAAGCAAGTC AAAATATTGA TGGTGGAAAA
TTATTCATGC TTGGAAATAG TTTTGGACGT ATGATCGGTT TAGGAATGGA AGGATCACAA
TTGAAAATTG TTATGAAAAC AAATGGTTTA GAGACATCGA AGTGGTTAAC AATTGCTGAA
AATTTATTAA AAGGCTTACC AGATGTAAAA AAAGAAGTAA TAAATGCCTA A
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| Protein sequence | MIGLLEQFYK NKEIQSVING LEDGLKEQLI SGMATSSRSL LMAALYKKTK KSQLIVTHNL
YQAQKVHEDL VALLGEKDVW LYPVNELIAS EIGVASPELK AQRIEVLNRL AAGENGIIVA
PVAGLRRFLP IKELWKQKQV EINLGQEIDL DALLHTLHHI GYERKSMVEA PGEFSLRGGI
LDIYPLTEEL PFRIEFFDTE VDSIRLFDVD EQRSQGKKES VKFGPATEFL FSQEELKSGI
QHLEEGLTKT MQKLSDDKLK TTVLETVSHE IEMLKNGQSI EQMFKYLSIF YKEPASLIDY
LPEDGVVILD EISRIQETAS HLETEEAEWY ISLLGEGTII QDLSFSHAFE GFLHHKKRNF
VYLTLFLRHI AHTHPQNIVN VTCKTMQDFH GQMNLLKTEI DRWNEGHFTT VVLGTDDERV
KKLQHILSDY DIEADIVEGT DILLSGRLQI AVGDLHAGFE MPMQKLVVIT EKELFHKKVK
KSQRKQKLSN AERIKSYSEL KVGDYVVHVN HGIGKFLGIE TLEINGVHKD YLNIKYQGND
KLYVPIEQID QVQKYVGSEG KDPKVYKLGG NDWKKVKTKV EKSVQDIADD LIKLYAEREA
SKGYAYTPDT AEQQEFESSF PYQETEDQLR SIDEIKKDME RGRPMDRLLC GDVGYGKTEV
AIRAAFKAIM DEKQVAILVP TTILAQQHYE TIRERFQDYP INIGLLSRFR TRKQQNETIK
GLKDGTIDIV IGTHRILSKD VTYKDLGLLI IDEEQRFGVT HKEKIKQLKA NVDVLTLTAT
PIPRTLHMSM LGVRDLSVIE TPPENRFPVQ TYVVEYNPAL MREAIERELA RGGQIYFLYN
RVEDIERKAD EISMLVPDAR VTYAHGKMNE SELESVMLSF LEGQHDVLVS TTIIETGVDI
PNVNTLIVFD ADRMGLSQLY QLRGRVGRSN RVAYAYFAYK RDKVLSEVAE KRLQAIKEFT
ELGSGFKIAM RDLSIRGAGN LLGAEQHGFI DSVGFDLYSQ MLKDAIEQRR GTDGAENTVN
VEIDLEVDAY LPDAYISDSK QKIMMYKQFR GVSAIEDIEE LQEEMIDRFG DYPQEVGYLL
QIANIKVLAM KEQIELIKQN KFEVTFLFSE QASQNIDGGK LFMLGNSFGR MIGLGMEGSQ
LKIVMKTNGL ETSKWLTIAE NLLKGLPDVK KEVINA
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