| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B5202 |
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| Symbol | rpoC |
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| ID | 7182144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus G9842 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011772 |
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| Strand | + |
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| Start bp | 111729 |
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| End bp | 115340 |
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| Gene Length | 3612 bp |
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| Protein Length | 1203 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643547893 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_002443649 |
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| Protein GI | 218895238 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000165097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 1.46015e-23 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGATAGATG TAAATAACTT TGAATATATG AAGATTGGAC TTGCTTCACC TGACAAGATT
CGTTCTTGGT CATACGGTGA AGTTAAGAAA CCAGAAACTA TTAACTATCG TACGTTAAAG
CCTGAAAAAG ATGGCTTGTT CTGTGAGCGT ATTTTCGGAC CACAAAAGGA CTGGGAATGT
CATTGCGGAA AATACAAACG TGTACGTTAT AAAGGTGTAG TTTGTGATCG ATGTGGCGTT
GAAGTAACGC GTGCAAAAGT ACGTCGTGAA CGTATGGGTC ATATTGAATT AGCTGCTCCT
GTATCTCATA TTTGGTATTT CAAAGGTATC CCGAGCCGCA TGGGACTTGT CTTAGACATG
TCCCCTCGCG CGCTTGAAGA AGTAATTTAT TTCGCTTCTT ATGTTGTAAC AGAAAGTGGA
GATACACCAC TTGATAAGAA GCAATTACTT TCTGAAAAAG AATACCGTGC ATATCGTGAT
CGATATGGTA GCACATTCCA AGCTGCTATG GGTGCAGAAG CGATTAAAAA GCTACTACAA
GACATCGATT TAGATAAAGA AGTAGACTTC TTAAAAGAAG AATTAAAAAC AGCACAAGGA
CAACGCCGTA CTCGTGCTAT TAAACGTCTA GAAGTATTAG AAGCATTCCG CAACTCTGGA
AATGAACCAT CTTGGATGAT CTTAGATGTT CTACCAGTAA TCCCACCAGA ACTACGCCCA
ATGGTACAGT TAGATGGTGG ACGTTTTGCT ACTTCTGACT TAAACGACTT ATATCGTCGT
GTAATTAACC GTAACAACCG TTTAAAACGT CTATTGGACC TAGGTGCTCC AAGCATCATC
GTTCAAAACG AAAAACGTAT GTTACAAGAA GCTGTAGACG CATTAATCGA TAATGGCCGT
CGTGGCCGTC CGGTTACTGG ACCAGGTAAC CGCCCATTAA AATCACTATC TCACATGCTT
AAAGGTAAAC AAGGACGTTT CCGTCAAAAC TTATTAGGTA AACGTGTTGA CTACTCTGGC
CGTTCTGTAA TCGTTGTAGG ACCGAACTTA AAGATGTACC AGTGTGGATT ACCGAAAGAA
ATGGCGCTTG AACTGTTCAA ACCTTTCGTT ATGAAAGAGT TAGTTGGAAA AGGCTTAGCA
CACAATATTA AGAGTGCGAA ACGTAAAATT GAGCGTGTAC ACCCTGAAGT TTGGGACGTT
TTAGAATCTG TGATTAAAGA GCATCCAGTA CTTCTAAACC GCGCACCAAC ACTTCACCGT
CTTGGTATCC AGGCGTTTGA ACCTACATTA GTAGAAGGTC GCGCAATTCG TCTTCATCCA
CTTGTATGTA CTGCATACAA CGCGGACTTT GACGGTGACC AAATGGCGGT TCACGTTCCG
TTATCATCAG AGGCACAAGC AGAAGCTCGT ATTCTTATGT TAGCGGCACA AAACATCTTG
AATCCAAAAG ACGGAAAACC AGTTGTTACT CCATCTCAGG ATATGGTATT AGGTAACTAC
TACTTAACAC TTGAGCGTGA AGGCGCAATC GGTGAAGGTA TGGTCTTCAA AGATGCAAAC
GAAGCAATAC TTGCATACCA AAATGGATAT GTACATCTGC ACACACGTGT TGCAGTTGCT
GCAAGTTCAG TAAATAACGT AACGTTTACT GAAGAGCAAA AGGGTAAGCT TCTATTAACA
ACAGTTGGTA AATTAATATT TAACGAAATC TTACCAGAGT CGTTCCCTTA TATTAATGAA
CCGACAAACT CAAACCTTGA AAAAGAAACA CCAGCGGAAT ATTTCGTTGA AAAAGGTGCG
AACATTAAAG AAATTATTGC TAGTCGCGAA GAAGTGGCAC CATTTAGCAA GAAGATCCTT
GGTAACATCA TTGCGGAAGT ATTCAAACGT TTCCAAATTA CGGAAACATC TCGCATGCTT
GACCGTATGA AAAACTTAGG ATTTAAGTAC TCTACAAAGG CTGGTATTAC AGTTGGGGTA
TCTGACATTC TTGTATTAGG TGAAAAAGAT GAAATTCTCC ATGAAGCACA AGCAAAAGTA
GATAATGTAA TTAAACAATT CCGTCGCGGT TTAATCACGG AAGAAGAACG TTACGATCGC
GTTATCTCTA TTTGGAGTAA TGCAAAAGAT GTTATCCAAG GAAAACTGAT GAAATCCTTG
AATAAACGCA ACCCAATCTT CATGATGAGT GATTCCGGTG CCCGTGGTAA CGCATCGAAC
TTTACTCAGC TTGCTGGTAT GCGTGGTCTG ATGGCCAATC CATCTGGTCG TATTATCGAA
CTTCCAATTA AATCAAGTTT CCGTGAAGGT TTAACAGTAC TTGAGTACTT CATCTCTACG
CATGGTGCGC GTAAAGGTCT TGCCGATACA GCACTTAAAA CTGCCGATTC TGGTTACTTA
ACGCGTCGTC TTGTAGACGT TGCACAAGAT GTAATTGTCC GTGAAGATGA TTGTGGAACA
GATCGTGGTC TATTAATTGG TGCGATTAAA GAGGGTAATG AAGTAATTGA GTCATTATAT
GATCGTCTTG TTGGACGTTT TGCAAGAAAA ACTGTAAAAC ATCCTGAAAC AGGTGAAGTA
TTAGTTAGTG AAAACCAATT AATTACTGAA GATATCGCTC ATATCGTTGA AAATTCGGGT
GTTGAAACTG TAAACATTCG TTCAGCGTTC ACGTGTAACA CTCGCCACGG TGTATGTAAG
AAGTGTTACG GTCGTAACTT AGCAACTGGT ACAGACGTAG AAGTAGGAGA AGCGGTAGGT
ATTATCGCAG CTCAATCTAT CGGTGAGCCA GGTACACAGT TAACGATGCG TACATTCCAT
ACAGGTGGGG TTGCCGGAGA TGATATCACT CAAGGTTTAC CTCGTATCCA AGAGATCTTC
GAAGCTCGTA ATCCGAAAGG TCAGGCAGTT ATCAGTGAAA TCGACGGTGT TATCGCAGCG
ATCAACGATG TTAAAGATCG CCAAGAAGTA GTTGTACAGG GTGAAGTTGA AGCTCGTACG
TATGCTATTC CTTACGGTGC TCGTCTGAAA GTAACTCCAG GACAGCCAAT TAGCCACGGT
AAAGAGTTAA CAGAAGGTTC TATTGATCCG AAAGAATTAC TAAAAGTAAC GGACATTACA
GCAGTGCAAG AATACTTATT ACGTGAAGTT CAAAAAGTAT ACCGTATGCA AGGGGTAGAA
ATTGGTGACA AACACGTAGA AGTAATGGTA CGCCAAATGC TACGTAAAGT TCGTGTAAGT
GATGCAGGTG AAACAGATGT ATTACCAGGA ACATTACTAG ATATCCATCA GTTTACTGAT
GCGAATGCGA AGGTGTTACT GAAAGGTAAA CAACCAGCGA CAGCTAGACC TGTTCTACTT
GGTATTACAA AAGCTTCACT TGAAACAGAT TCGTTCTTAT CTGCAGCTTC GTTCCAAGAA
ACAACTCGTG TTTTAACGGA TGCAGCAATT AAAGGTAAAC GCGATGAGCT TCTAGGATTG
AAAGAGAATG TTATTATCGG TAAGCTTGTT CCTGCTGGAA CAGGTATGAA TCGTTATCGT
AAAGTGGATC TTGTAAAAAC AACACAAGAT AACATGAATG TAGAAAACGA TGAAGTTTAT
GTGGAACAGT AA
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| Protein sequence | MIDVNNFEYM KIGLASPDKI RSWSYGEVKK PETINYRTLK PEKDGLFCER IFGPQKDWEC
HCGKYKRVRY KGVVCDRCGV EVTRAKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLVLDM
SPRALEEVIY FASYVVTESG DTPLDKKQLL SEKEYRAYRD RYGSTFQAAM GAEAIKKLLQ
DIDLDKEVDF LKEELKTAQG QRRTRAIKRL EVLEAFRNSG NEPSWMILDV LPVIPPELRP
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPSII VQNEKRMLQE AVDALIDNGR
RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIVVGPNL KMYQCGLPKE
MALELFKPFV MKELVGKGLA HNIKSAKRKI ERVHPEVWDV LESVIKEHPV LLNRAPTLHR
LGIQAFEPTL VEGRAIRLHP LVCTAYNADF DGDQMAVHVP LSSEAQAEAR ILMLAAQNIL
NPKDGKPVVT PSQDMVLGNY YLTLEREGAI GEGMVFKDAN EAILAYQNGY VHLHTRVAVA
ASSVNNVTFT EEQKGKLLLT TVGKLIFNEI LPESFPYINE PTNSNLEKET PAEYFVEKGA
NIKEIIASRE EVAPFSKKIL GNIIAEVFKR FQITETSRML DRMKNLGFKY STKAGITVGV
SDILVLGEKD EILHEAQAKV DNVIKQFRRG LITEEERYDR VISIWSNAKD VIQGKLMKSL
NKRNPIFMMS DSGARGNASN FTQLAGMRGL MANPSGRIIE LPIKSSFREG LTVLEYFIST
HGARKGLADT ALKTADSGYL TRRLVDVAQD VIVREDDCGT DRGLLIGAIK EGNEVIESLY
DRLVGRFARK TVKHPETGEV LVSENQLITE DIAHIVENSG VETVNIRSAF TCNTRHGVCK
KCYGRNLATG TDVEVGEAVG IIAAQSIGEP GTQLTMRTFH TGGVAGDDIT QGLPRIQEIF
EARNPKGQAV ISEIDGVIAA INDVKDRQEV VVQGEVEART YAIPYGARLK VTPGQPISHG
KELTEGSIDP KELLKVTDIT AVQEYLLREV QKVYRMQGVE IGDKHVEVMV RQMLRKVRVS
DAGETDVLPG TLLDIHQFTD ANAKVLLKGK QPATARPVLL GITKASLETD SFLSAASFQE
TTRVLTDAAI KGKRDELLGL KENVIIGKLV PAGTGMNRYR KVDLVKTTQD NMNVENDEVY
VEQ
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