| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B4828 |
|---|
| Symbol | rocR1 |
|---|
| ID | 7184665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 460690 |
|---|
| End bp | 462093 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643548247 |
|---|
| Product | arginine utilization regulatory protein RocR |
|---|
| Protein accession | YP_002443959 |
|---|
| Protein GI | 218895548 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00181095 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 104 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACAG AAGACATTAA TTTTAAACAG ATCATTGAAA TGAATATGCT ATATGAAACT
TTACTCAATG AACTCGATAT CGGGATTCAT ATTATTAATG AGGAAAGTAA AACGATTGTC
TATAACCGCA AAATGATGGA AATTGAATCA ATGGATCGCT TAGATGTGCT ATATAAAAGT
CCTTTAGAGG TATTTGCATT TGAAGAAAAT AAAAATAGTA CTCTTATAGA GGCATTAAAA
TTTGGAAAAA CAAAGAAAAA TATAAAACAA ACGTATTTTA ACAATAAAGG ACAAGAAATT
ACAACGATTA ACGATACTTT CCCTATAATA GAAAATGGAA AAATTAAAGG TGCCATTGAA
ATATCAAAAG AGATCAGTCA CTTAAAGCAA ACAATAAGAA TAGGCCCTTC TCGAAAACAA
AGCACTAAAT TTACCTTTGA TCACATAATT GGTGATTCTG AAGCAATTCA ATCCATCATT
ACAGAAGGAA AAAGAGTAAT TCGTACATCT TCCTCCATAC TTCTCGTAGG AGAAACAGGT
ACTGGTAAGG AACTATTTGC ACAAAGCATC CATAATGAAA GTCAGCGTTC AACAAAACCT
TTTATTTCAC AAAACTGTGC CGCTATACCT GATACCTTAA TGGAAAGCCT ATTATTTGGT
ACAAATCGAG GTGCCTTTAC AGGAGCAATA GATAAACCAG GTTTATTCGA AGAATCAAAC
GGAGGAACTT TGTTATTAGA TGAAATCAAT TCATTAAGCC CAATTCTTCA AGCTAAGTTG
CTACGGGCTA TACAAGAAAA AACAATAAGA AGAATCGGAG GTACACACGA AAAAGAAATT
GATGTTCGTA TTATAGCAAC TATTAATGAA GATCCCTTCG AAGCCATCGC ACATGATCGA
TTAAGAGAAG ACTTATATTA CCGATTAAGC GTCGTTACTT TATGTCTTCC GCCTTTACGG
GAAAGAAAAG AAGATATTCC AGCTCTTGTT CAGCACTTTA TTAAAAAATA TAATACTCAA
TTCGTGCTCA ACGTAACCGA TGTAGATGTA AATGTAAGTG AATTTTTCTA TGCATACGAT
TGGCCTGGAA ACGTACGGGA ATTGGAACAT ATAATTGAAG GTTCCATGAA CTTGATAGAA
GATGAAACCA TCATTACAGC TTTTCATCTT CCTACTCGCT TTCGCGAACA AATAAAAAAA
GAATTCAACA TGCAGCATAC ACTAACTAAT CACAATACTG ATGCACCTAA AACTTTAAAA
CACACAATAG AAAAAATGGA AAAAAACTAC ATCAATCAAA TTCTTAAAGA GAATCACGGT
AACATCTCAC AAGCTGCAAA ATTTTTAGGA TTAAGTAGAC AAAATTTACA ATATCGAATT
AAAAAACTGC ATTTACACAT ATGA
|
|---|
| Protein sequence | MRTEDINFKQ IIEMNMLYET LLNELDIGIH IINEESKTIV YNRKMMEIES MDRLDVLYKS
PLEVFAFEEN KNSTLIEALK FGKTKKNIKQ TYFNNKGQEI TTINDTFPII ENGKIKGAIE
ISKEISHLKQ TIRIGPSRKQ STKFTFDHII GDSEAIQSII TEGKRVIRTS SSILLVGETG
TGKELFAQSI HNESQRSTKP FISQNCAAIP DTLMESLLFG TNRGAFTGAI DKPGLFEESN
GGTLLLDEIN SLSPILQAKL LRAIQEKTIR RIGGTHEKEI DVRIIATINE DPFEAIAHDR
LREDLYYRLS VVTLCLPPLR ERKEDIPALV QHFIKKYNTQ FVLNVTDVDV NVSEFFYAYD
WPGNVRELEH IIEGSMNLIE DETIITAFHL PTRFREQIKK EFNMQHTLTN HNTDAPKTLK
HTIEKMEKNY INQILKENHG NISQAAKFLG LSRQNLQYRI KKLHLHI
|
|---|
| |