| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B4671 |
|---|
| Symbol | treR |
|---|
| ID | 7184654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | + |
|---|
| Start bp | 624165 |
|---|
| End bp | 624875 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643548403 |
|---|
| Product | trehalose operon repressor |
|---|
| Protein accession | YP_002444096 |
|---|
| Protein GI | 218895685 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02404] trehalose operon repressor, B. subtilis-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 1.38863e-21 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGTA AGTATGAACA AATTTATACA GAAATCAGTA AATCTATTGA TAATAAACAA
TTAAAAGAGG GATGCAAAAT CCCATCAGAA ACAGAATTAA TGAAGCAGTA TGAGGCAAGC
CGAGGCACGG TAAGAAAAGC TGTAGATTTA CTGCAAGAGC GTGGATATGT GCAAAAAATT
CATGGAAAAG GTGTTTTTGT TTTAAAGCGA AAAAATATTG AATTTAATTT TGGCGGTATT
GTAAGTTTCC AAGAAGAAAA TGAACGTTTA GGACGTCATT GTATTACGGA AGTTGTGGAA
ATGGACAAAG AAAAAGCCAC AAAAGAAATT GCGAAATTAT TAAATGTAAA AGAAAAAACA
GAGATTGATC ATATTAAACG TGTACGAAAT ATTGATGGAG AAAAAGTAAT TTTAGATATA
AATCATTTTG TATCTGAGTT TATTCCAGGA TTAACGAAAG AAATTGCAAC TGCATCGATT
TATAAATACA TTGAGAAAGA GCTTGGGCTA CATATTAGTT ATTCGCAGAG GATAATTGAA
GTACAGCCGT GTACAGAGGA TGACAGAAAG TATTTAGATT TAAATGGAAC AGACTATGTT
GTCGTTGTGA AAAACTTTAC ACATTTGTAT GATGGAAGTC AGTTTGAATA CACAGAATCA
CGCCACCGTT TAGATATTTT TCACTTTTCG GATGTGGCAC GCAGGAAGTA A
|
|---|
| Protein sequence | MMSKYEQIYT EISKSIDNKQ LKEGCKIPSE TELMKQYEAS RGTVRKAVDL LQERGYVQKI
HGKGVFVLKR KNIEFNFGGI VSFQEENERL GRHCITEVVE MDKEKATKEI AKLLNVKEKT
EIDHIKRVRN IDGEKVILDI NHFVSEFIPG LTKEIATASI YKYIEKELGL HISYSQRIIE
VQPCTEDDRK YLDLNGTDYV VVVKNFTHLY DGSQFEYTES RHRLDIFHFS DVARRK
|
|---|
| |