Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B4270 |
Symbol | sigB |
ID | 7184581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | + |
Start bp | 985138 |
End bp | 985911 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643548795 |
Product | RNA polymerase sigma factor SigB |
Protein accession | YP_002444466 |
Protein GI | 218896055 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02941] RNA polymerase sigma-B factor [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0899706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00271333 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAATCC AATCTCAACC TACAACTCTT ACTAAAGAAG ACGTTATTAA GCTAATTGCA GAATTCCAAC AAAACCAATG TAATGAAGCG CAGGAAAGGT TAGTTGATCA TTATAAAAAT CTCGTATATT CCATTGCATA TCGCTATTCA AAAGGCGGGC CGATGCATGA GGATATTATA CAAGTAGGGA TGTTAGGGCT CTTAGGCGCA ATAAGAAGGT ATGATTATTC GATAGGGAAT GCTTTTGAGC CGTTTGCAAT ACCTACAATA GTAGGCGAAA TAAAGAAGTA TTTACGTGAT AAAACTTGGG GTATTCATGT TCCAAGGCGA ATTAAAGATT TAGGCGGGAA AATTAAACTT GCGATAGAGG AGTTAACAGA TCACCTGCAA CGTTCACCGA AGATAATAGA AATTGCAAAT CATTTAGGAC TATCGGAAGA GGAAGTTCTA GAGATTATGG ATGCGAAAAA TAATTATCGA GTATCTTCCT TAGATGATGT AGTTGAAAAT TCATCTGATG GAAGTTCGGT AGCGAGAATT GAATCTGTAG GTGAAGTAGA GCAAGGATAT GAACAGACAG AAAGACGTCT CGTTTTAGAG GATATTTTTA ACGTATTAAA TGATACGGAA AAGAGTGTTA TTCATTATAT ATTTGGAGAA AATTTAAATC AAAAAGATAC AGGAGAACGG TTAGGTATTT CGCAAATGCA CGTTTCTCGT ATTAAAAGAC AAGCGATAAG TAAATTGAAG CAAGCTGCAT TTTTAGATAC ATAA
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Protein sequence | MEIQSQPTTL TKEDVIKLIA EFQQNQCNEA QERLVDHYKN LVYSIAYRYS KGGPMHEDII QVGMLGLLGA IRRYDYSIGN AFEPFAIPTI VGEIKKYLRD KTWGIHVPRR IKDLGGKIKL AIEELTDHLQ RSPKIIEIAN HLGLSEEEVL EIMDAKNNYR VSSLDDVVEN SSDGSSVARI ESVGEVEQGY EQTERRLVLE DIFNVLNDTE KSVIHYIFGE NLNQKDTGER LGISQMHVSR IKRQAISKLK QAAFLDT
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