Gene BCG9842_B3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B3540 
Symbol 
ID7184099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp1659860 
End bp1660342 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content35% 
IMG OID643549513 
ProductRNA polymerase sigma factor SigW 
Protein accessionYP_002445183 
Protein GI218896772 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAACAT ATCGTCATTA TATTTTTCAA GTTATCTTTT CTATTGTAAG ACATGAAGAA 
GATGCGAAAG ATGTTACACA AGAAGTATTC GTAAAAATTC ACGCCTCTCT CCCAAATTAT
CAATTTCGCG GATTAAAAAC GTGGATGGCA CGTATTGCCA CCAATCACGC TATTGATTAT
AAGAGGAAGA AAGCTCGAGA AAGTGAAGAA CTCTCCTTAT GTAAAGAAAA TGAGGAAAAT
ATACAGTCCT CTCATAATAT TGAGGCTTTA TTATTGACGA AAGAGCAGAA ATTACTCATT
GCTCAAAAAC TGAGAGAACT TCCTGAAAAT TACCGTGACG TCGTTCTCGC ACATTACTTA
CAAGAAAAAA GCTATCAAGA AATTGCTTTA CAGGAAAACA TTGAAGTAAA AACAGTCGAA
ATGAAACTGT ATCGGGCAAG AAAATGGATT AAAAAACATT GGAAGGAGGA AGAGTTTCTA
TGA
 
Protein sequence
MQTYRHYIFQ VIFSIVRHEE DAKDVTQEVF VKIHASLPNY QFRGLKTWMA RIATNHAIDY 
KRKKARESEE LSLCKENEEN IQSSHNIEAL LLTKEQKLLI AQKLRELPEN YRDVVLAHYL
QEKSYQEIAL QENIEVKTVE MKLYRARKWI KKHWKEEEFL