| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B3449 |
|---|
| Symbol | pyn1 |
|---|
| ID | 7186438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | + |
|---|
| Start bp | 1757161 |
|---|
| End bp | 1758462 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643549602 |
|---|
| Product | pyrimidine-nucleoside phosphorylase |
|---|
| Protein accession | YP_002445272 |
|---|
| Protein GI | 218896861 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0213] Thymidine phosphorylase |
|---|
| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0452293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 9.91695e-16 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATGG TAGATATTAT CGCAAAAAAA CGTGACGGCA AAGAACTAAC GACTGAAGAA
ATCAAATTCT TTATTAATGG ATATACAGAC GGAAGTATTC CTGATTATCA AGTGAGTGCG
CTTGCAATGG CAATCTTCTT TAAAGATATG ACAGATCGCG AACGTGCAGA TTTAACGATG
GCGATGGTTG AGTCTGGAGA AACGATCGAC TTATCAGCAA TTGAAGGAAT TAAAGTAGAC
AAACATTCAA CTGGCGGTGT TGGTGATACA ACAACTTTAG TATTAGGACC ATTAGTTGCT
GCTTTAGATG TACCAGTAGC AAAAATGTCT GGTCGTGGTT TAGGACATAC AGGCGGAACA
ATTGATAAAT TAGAAGCGGT AGAAGGATTC CACGTTGAAA TTACGAAAGA ACAATTCATT
GATATTGTAA ACCGTGACAA AGTAGCTGTT ATTGGACAAA CAGGAAACTT AACACCTGCA
GATAAAAAGA TTTATGCATT ACGCGACGTA ACAGGAACTG TTAACTCAAT TCCTTTAATC
GCAAGTTCAA TTATGAGTAA AAAAATTGCA GCTGGTGCTG ACGCAATTGT ACTTGATGTA
AAAACAGGTG CTGGTGCATT TATGAAAACA GAAGAAGATG CAAAAGAATT AGCACATGCA
ATGGTACGTA TCGGAAATAA TGTAGGACGT CAAACTATGG CTGTTATTTC GGACATGTCA
CAACCGCTTG GTTTTGCGAT TGGTAACGCT CTAGAAGTAA AAGAAGCGAT TGACACGTTA
AAAGGTGAAG GTCCAGAAGA TTTAACAGAA TTAGTACTTG TATTAGGTAG CCAAATGGTC
GTACTTGCGA AAAAAGCAAA TACGTTAGAA GAAGCTCGTG AAATGCTAAT TGAAGTGATG
AAAAACGGAA AAGCAACTGA GAAATTTAAA GAGTTCTTAA GCAATCAAGG CGGAGATAGC
TCAATTGTAG ACAATCCAGA AAAAATGCCA CAAGCGAAGT ATGTAATTGA TGTACCTGCA
AAAACTTCAG GTGTTATTTC TAACATTGTT GCAGATGAGA TTGGTATTGC AGCTATGTTA
CTTGGTGCAG GTCGTGCAAC GAAGGAAGAT GAAATCGATT TAGCAGTAGG ATTAATGTTA
CGTAAAAAAG TTGGCGATGC AGTAAAAGAA GGCGAGCCAT TCGTAACAAT CTACGCAAAT
CGTGAAAATG TAGAAGATGT AAAAGCAAAA ATTTATGAGA ACATCTCTAT CGCTGAAACA
GCAGTGGCTC CTAAATTAGT TCATACAGTT ATTACTGACT AA
|
|---|
| Protein sequence | MRMVDIIAKK RDGKELTTEE IKFFINGYTD GSIPDYQVSA LAMAIFFKDM TDRERADLTM
AMVESGETID LSAIEGIKVD KHSTGGVGDT TTLVLGPLVA ALDVPVAKMS GRGLGHTGGT
IDKLEAVEGF HVEITKEQFI DIVNRDKVAV IGQTGNLTPA DKKIYALRDV TGTVNSIPLI
ASSIMSKKIA AGADAIVLDV KTGAGAFMKT EEDAKELAHA MVRIGNNVGR QTMAVISDMS
QPLGFAIGNA LEVKEAIDTL KGEGPEDLTE LVLVLGSQMV VLAKKANTLE EAREMLIEVM
KNGKATEKFK EFLSNQGGDS SIVDNPEKMP QAKYVIDVPA KTSGVISNIV ADEIGIAAML
LGAGRATKED EIDLAVGLML RKKVGDAVKE GEPFVTIYAN RENVEDVKAK IYENISIAET
AVAPKLVHTV ITD
|
|---|
| |