| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B3433 |
|---|
| Symbol | topB2 |
|---|
| ID | 7182533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | + |
|---|
| Start bp | 1770231 |
|---|
| End bp | 1772375 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643549618 |
|---|
| Product | DNA topoisomerase III |
|---|
| Protein accession | YP_002445288 |
|---|
| Protein GI | 218896877 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0550] Topoisomerase IA |
|---|
| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000032124 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00000000499159 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA TTATTGCCGA GAAACCAGAT CAAGGGTTGG CTCTTGTTTC ACAGTTTAAA
TATCGCCGGA AAGATGGATA TTTAGAAGTA GAAGCGAATG AGTTATTTCC AAATGGAGCG
TACTGTACAT GGGCAATTGG TCATTTGACG CAGTTATGTA ATCCAGAGCA TTATCACGCA
GAGTGGAAAA AATGGTCACT TAATACGTTA CCGATGATTC CAGAACGTTT TCAATTTGAA
GTAACAAAGT CAAAGTATAA GCAATTTAAC GTTGTGAAAC AGCTGTTACA TAATCCACAG
GTAACAGAAA TCATTCACGC AGGAGATGCT GGGCGTGAAG GGGAACTGAT CGTACGAAAT
ATTATTAATC TTTGTAACGT GCAAAAGCCG ATGAAACGTC TATGGATTTC GTCTTTAACG
AAGCAAGCTA TTTATCAAGG GTTTAAAAAT TTACTTGATG AATCAGATAC AATTAATACG
TATTACGAAG CATACACAAG ATCTTGTGCT GACTGGGTTG TTGGCATGAA TGCATCACGT
GTGTTTAGTA TTTTGTTAAA GAAAAAAGGA ATGAATGATG TATTTTCTGC TGGTCGTGTC
CAAACACCAA CGTTAGCATT GATTGTAAAG CGTGAGAAAG AAATTGAAAA CTTTAAGTCA
GAGCCTTTCT GGGAAGTGTT TGCAACCTTT AATATAGAAG GAAAGAAATA TGACGGGAAA
TGGGAGAAGG ATAATGAATC CCGCTTAAAA GACCCTGATA TGGCGAATAA AATTGCGGCA
TTTTGCCAAG GGAAACCGGC TGTTGTGAAG GAAATGAAAA CGGAGCGTAA AGAGTTTCAG
CCGCCGCTTT TATTCAACTT ATCATCACTG CAAGCAACGG CAAATAAAGC CTTTAAGTTT
TCACCGAAAA AGACGCTTGA TATAACGCAA GCACTCTATC AAAAAGGGAT TGTTTCTTAT
CCACGTTCAG ATTCTAACTA TGTTACTCAA GGAGAAGCAG CGACTTTCCC TGATATTTTA
CAGAAGTTAA GTCAGTTTGA TGAATATAAA GGTTTATTAC CGGCTCCGGT TGAATCCATT
ATGAACAATA AGCGTTATGT AAATGAAAAG AAAGTAACAG ATCACTACGC GATTATTCCG
ACAGAGCAAG TTACAAACCC AAGCAGACTA TCAGGTGATG AAAAGAAAAT ATACGATATG
ATCGTAAGAA GGCTTATTGC AGCTCATTAT GAAGTTGCAA TCTTTGACTA TACAACGATT
GTAACGCTTG TAGATGAACG TGCTGAATTC ATTTCAAAAG GAAAACAGCA AATTCAAGAA
GGTTGGCGTA AAGTTATTTT CCAAGACGAT AAAGATGACG AAACCATTCT TCCAATTGTA
GCTGAAGGTG AAGAAGGAAA AGTTGTAAAG GTGAAAGTGA AAGAAGGAAA AACACAGCCA
CCGAAGCGTT ATACAGAAGG ACAACTTATT ACGTTAATGA AAACAGCCGG TAAGTATTTA
GAGAATGAAG AGCTAGAGAA GGTATTGAAG AAAACAGAAG GTTTAGGTAC GGAAGCGACC
CGCGCGGGTA TTATTACGAT GCTGAAAGAC CGTAAATATA TAGATGTAAA GAAAAACCAA
GTGTATGCGA CTGATAAAGG AAAAGTATTA ATTACCGCAA TTGGTGACAA AATACTAGCT
TCACCGGAAA TGACTGCGAA ATGGGAACAA CGTCTTGCGG AAATTGGTGA AGGTACAGCT
TCACCAGCTA CATTTATGGA ACAGACGAAA AAGCTATCAG CTAAAATTAT TGAAGACGCA
GTGGAAATGT CTGAGAAGTG GGATTTCACG GGACTACATG TTGAATCGAT TGAACGAAAA
GGATCGAAAT TTACAACGGG TAAAAAGGTT GGTAGCTGTA AAAAATGTGA TGGCGATGTA
ATTGATAAGT CAACGTTTTA CGGTTGTTCT AACTATAATA CAACGCAATG TGATTTCACC
ATTTCAAAGA AGATATTAAG TAAAACAATT TCGCAAAAGA ATATGACAAA GCTCTTAAAA
GGTGAAAAGA CTGATTTAAT TAAAGGCTTT AAAAAGGGCG AGAAAACGTT TGATGCGAAA
TTAGAGTGGA AAGATAATAA GATTAATTTT GTATTTGAGA ATTAA
|
|---|
| Protein sequence | MKLIIAEKPD QGLALVSQFK YRRKDGYLEV EANELFPNGA YCTWAIGHLT QLCNPEHYHA
EWKKWSLNTL PMIPERFQFE VTKSKYKQFN VVKQLLHNPQ VTEIIHAGDA GREGELIVRN
IINLCNVQKP MKRLWISSLT KQAIYQGFKN LLDESDTINT YYEAYTRSCA DWVVGMNASR
VFSILLKKKG MNDVFSAGRV QTPTLALIVK REKEIENFKS EPFWEVFATF NIEGKKYDGK
WEKDNESRLK DPDMANKIAA FCQGKPAVVK EMKTERKEFQ PPLLFNLSSL QATANKAFKF
SPKKTLDITQ ALYQKGIVSY PRSDSNYVTQ GEAATFPDIL QKLSQFDEYK GLLPAPVESI
MNNKRYVNEK KVTDHYAIIP TEQVTNPSRL SGDEKKIYDM IVRRLIAAHY EVAIFDYTTI
VTLVDERAEF ISKGKQQIQE GWRKVIFQDD KDDETILPIV AEGEEGKVVK VKVKEGKTQP
PKRYTEGQLI TLMKTAGKYL ENEELEKVLK KTEGLGTEAT RAGIITMLKD RKYIDVKKNQ
VYATDKGKVL ITAIGDKILA SPEMTAKWEQ RLAEIGEGTA SPATFMEQTK KLSAKIIEDA
VEMSEKWDFT GLHVESIERK GSKFTTGKKV GSCKKCDGDV IDKSTFYGCS NYNTTQCDFT
ISKKILSKTI SQKNMTKLLK GEKTDLIKGF KKGEKTFDAK LEWKDNKINF VFEN
|
|---|
| |