| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B1339 |
|---|
| Symbol | pnp |
|---|
| ID | 7186578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 3789887 |
|---|
| End bp | 3792025 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643551700 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_002447370 |
|---|
| Protein GI | 218898959 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.0729219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG AAAAGCAAGT CTTCTCGATA GATTTAGCTG GTCGCCAGCT AACAGTTGAA
ACTGGTCAGC TTGCCAAACA AGCGAACGGA GCAGTATTAG TAAGATATGG CGATACAGCG
GTTCTATCTA CAGCAACTGC ATCAAAAGAA GCTAAAAATG TAGATTTTTT CCCACTTACA
GTAAACTATG AAGAGCGTTT ATATGCAGTC GGAAAAATTC CTGGCGGTTT TATTAAGCGT
GAAGGTCGTC CAAGTGAAAA AGCAATTTTG GCAAGTCGTT TAATCGACCG TCCAATTCGT
CCGCTATTCG CAGATGGTTT CCGTAACGAA GTGCAAGTTG TCAGCATTGT AATGAGTGTT
GATCAAGATT GTTCTTCTGA AATGGCAGCT ATGCTTGGTT CTTCATTAGC GTTATCGATT
TCAGATATTC CATTTGAAGG TCCAATCGCT GGTGCGACAG TTGGTCGTAT TAATGGCGAA
TTCGTTATTA ATCCAACAGT AGAACAGCAA GAACAAAGTG ATATCCACTT AGTTGTAGCT
GGTACGAAAG ATGCGATTAA CATGGTTGAA GCAGGAGCAG ATCAAGTGCC TGAAGAAACA
ATGTTAGAAG CAATTATGTT TGGTCATGAC GAAATTAAAC GTTTAATTGC ATTCCAAGAA
GAGATTGTAC AAGCTGTAGG TAAAGAGAAA TCAGAAGTGA AACTTTATGA AGTTGACGCT
GATCTTAATC AAGCTGTACG TGAAATGGCT GAGAAGGATA TGCATTCTGC AATTCAAGTA
CATGAGAAAC ATGCACGTGA AGATGCAATT AACGAAGTGA AAAAGCGTGT AATTGAGCAT
TACGAAGCTG AAGAAGCTGA CGCTGATACA TTAGGACAAG TAAATGAGAT TTTATATAAA
ATTGTAAAAG AAGAAGTACG TCGTCTTATT ACAGTTGAAA AAATTCGCCC AGATGGCCGT
AAAGGTGACG AAATCCGTCC TTTAGCATCA GAGGTTGGTA TTTTATCTCG TACACACGGT
TCTGGTTTAT TCACACGTGG ACAAACACAA GCATTAAGTA TTTGTACATT AGGTGCATTA
GGCGATGTGC AAATTTTAGA TGGTCTTGGT GTAGAAGAAT CAAAACGCTT TATGCACCAT
TACAATTTCC CATCATTTAG TGTTGGTGAA ACAAGACCGA TGCGTGGACC AGGTCGTCGT
GAAATTGGTC ACGGGGCACT AGGAGAGCGC GCACTTGAGC CTGTAATTCC ATCTGAAAAA
GATTTCCCAT ACACAGTACG CCTTGTATCT GAAGTATTAG AATCAAATGG TTCTACTTCA
CAAGCAAGTA TTTGTGGTAG TACTTTAGCA ATGATGGATG CGGGTGTTCC ACTTAAAGCT
CCAGTTGCAG GTATTGCAAT GGGTCTGGTT AAATCTGGTG AGCATTACAC AATTTTATCT
GATATTCAAG GTATGGAAGA TCATTTAGGT GATATGGACT TTAAAGTAGC AGGTACAGCA
CAAGGTGTAA CTGCACTGCA AATGGACATT AAAATCGATG GTTTATCACG TGAGATTTTA
GAAGAGGCAT TACAACAAGC GAAAATTGGT CGTGTGCACA TTCTAAATCA TATGTTATCT
GTTATTGCAG AGCCACGTAC TGAATTATCA GCTTACGCTC CAAAGATTAT TACAATGACA
ATTAACCCAG ATAAAATCCG TGACGTTATT GGACCAAGCG GTAAACAAAT CAATAAAATT
ATTGAAGAAA CTGGTGTTAA AATTGACATC GAGCAAGATG GTACAGTATT CATTTCATCA
ATAAATCAAG AAATGAACGA CAAAGCTAAG AAGATTATCG AAGATATCGT TCGCGAAGTA
CAAGTAGGTG AGATCTACGA AGGAAAAGTG AAACGTGTTG AGAAATTCGG TGCTTTCGTT
GAATTATTCA GCGGTAAAGA TGGATTAGTT CATATTTCTG AACTTGCACT TGAGCGTGTA
GGTAAAGTAG AAGACGTTGT GAAAATCGGT GATGTAATTA CAGTTAAAGT TATCGAGATT
GACAAGCAAG GTCGCGTAAA TCTATCTAGA AAAGTATTGC TAAAAGAAGA GCAAGAAAAA
GAAGCTGCTA AAGAAGAAGA CAAACAAGAG CAGCAATAA
|
|---|
| Protein sequence | MSQEKQVFSI DLAGRQLTVE TGQLAKQANG AVLVRYGDTA VLSTATASKE AKNVDFFPLT
VNYEERLYAV GKIPGGFIKR EGRPSEKAIL ASRLIDRPIR PLFADGFRNE VQVVSIVMSV
DQDCSSEMAA MLGSSLALSI SDIPFEGPIA GATVGRINGE FVINPTVEQQ EQSDIHLVVA
GTKDAINMVE AGADQVPEET MLEAIMFGHD EIKRLIAFQE EIVQAVGKEK SEVKLYEVDA
DLNQAVREMA EKDMHSAIQV HEKHAREDAI NEVKKRVIEH YEAEEADADT LGQVNEILYK
IVKEEVRRLI TVEKIRPDGR KGDEIRPLAS EVGILSRTHG SGLFTRGQTQ ALSICTLGAL
GDVQILDGLG VEESKRFMHH YNFPSFSVGE TRPMRGPGRR EIGHGALGER ALEPVIPSEK
DFPYTVRLVS EVLESNGSTS QASICGSTLA MMDAGVPLKA PVAGIAMGLV KSGEHYTILS
DIQGMEDHLG DMDFKVAGTA QGVTALQMDI KIDGLSREIL EEALQQAKIG RVHILNHMLS
VIAEPRTELS AYAPKIITMT INPDKIRDVI GPSGKQINKI IEETGVKIDI EQDGTVFISS
INQEMNDKAK KIIEDIVREV QVGEIYEGKV KRVEKFGAFV ELFSGKDGLV HISELALERV
GKVEDVVKIG DVITVKVIEI DKQGRVNLSR KVLLKEEQEK EAAKEEDKQE QQ
|
|---|
| |