| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B1168 |
|---|
| Symbol | pdhD |
|---|
| ID | 7183394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 3954645 |
|---|
| End bp | 3956057 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643551866 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_002447536 |
|---|
| Protein GI | 218899125 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGTAG GAGATTTCCC AATTGAATTA GATACAGTCG TTGTTGGTGC AGGTCCTGGT
GGATACGTTG CGGCAATTCG TGCAGCACAA TTAGGTCAAA AGGTAGCAAT TATTGAAAAA
GCTAACCTTG GTGGCGTATG CTTAAACGTT GGATGTATTC CTTCAAAAGC GTTAATCAAT
GCAGGTCATC GTTATGAGAA TGCAATGCAT TCTGATGACA TGGGTATCAC TGCAGAGAAC
GTAAAAGTTG ACTTTACAAA AGTTCAAGAA TGGAAAAACG GCGTAGTTAA GAAATTAACT
GGCGGTGTTG AAGGCCTTCT TAAAGGTAAC AAAGTTGAAA TCATTCGCGG TGAAGCTTAC
TTCGTAGATG CTAACACATT ACGCGTTATG ACTGAAGATG CAGCTCAAAC TTATACGTTT
AAAAATGCTG TTCTTGCAAC TGGTTCTACA CCAATCGAAA TTCCAGGATT CAAATACTCT
AAACGTGTTA TCAACTCTAC AGGTGCTTTA AGCTTACCTG AAATTCCTAA AAAACTTGTT
GTAATCGGCG GCGGTTACAT CGGTATGGAA TTAGGTACTG CATATGCTAA CTTCGGTACA
GAAGTTACTG TAGTAGAAGC TGGCGACGAA ATCTTAGCTG GTTTCGAAAA AGCTATGAGC
TCTGTTGTTA AACGTGCTCT ACAGAAAAAA GGTAACGTAA ATATCCATAC AAAAGCTATG
GCTAAAGGCG TTGAAGAAAC AGAAACTGGC GTAAAAGTTA GCTTTGAAGT TAAAGGTGAA
ATCCAAACTG TAGAAGCAGA TTACGTATTA GTAACTGTAG GTCGTCGTCC AAACACTCAA
GAAATCGGTC TTGAGCAAGT TGGAGTTAAA ATGACTGACC GCGGCATCAT CGAAATCGAT
GAGCAATGTC GTACAAATGT ACCAAACATC TATGCAATCG GTGATATCGT TCCTGGACCA
CCATTAGCTC ACAAAGCTTC TTACGAAGGT AAAGTAGCTG TAGAAGCAAT TAGTGGCCAT
GCATCAGCTA TCGATTACAT CGGAATTCCT GCAGTATGCT TCACTGATCC AGAATTAGCA
TCTGTTGGTT ACACTAAAAA ACAAGCTGAA GAAGCTGGAA TGACTGTAAC TGTATCTAAG
TTCCCATTCG CTGCTAACGG TCGTGCATTA TCATTAAACA GCACTGACGG TTTCCTACAA
CTTGTAACAC GTAAAGAAGA TGGTCTTCTT GTAGGTGCTC AAGTTGCAGG TGCAGGTGCT
TCTGATATTA TCTCTGAGAT TGGTTTAGCT ATCGAAGCTG GAATGACAGC TGAAGATATC
GCTCAAACAA TCCATGCTCA CCCAACATTA GGTGAAATCA CAATGGAAGC AGCTGAAGTT
GCTCTTGGAA TGCCAATTCA CATTGTAAAA TAA
|
|---|
| Protein sequence | MVVGDFPIEL DTVVVGAGPG GYVAAIRAAQ LGQKVAIIEK ANLGGVCLNV GCIPSKALIN
AGHRYENAMH SDDMGITAEN VKVDFTKVQE WKNGVVKKLT GGVEGLLKGN KVEIIRGEAY
FVDANTLRVM TEDAAQTYTF KNAVLATGST PIEIPGFKYS KRVINSTGAL SLPEIPKKLV
VIGGGYIGME LGTAYANFGT EVTVVEAGDE ILAGFEKAMS SVVKRALQKK GNVNIHTKAM
AKGVEETETG VKVSFEVKGE IQTVEADYVL VTVGRRPNTQ EIGLEQVGVK MTDRGIIEID
EQCRTNVPNI YAIGDIVPGP PLAHKASYEG KVAVEAISGH ASAIDYIGIP AVCFTDPELA
SVGYTKKQAE EAGMTVTVSK FPFAANGRAL SLNSTDGFLQ LVTRKEDGLL VGAQVAGAGA
SDIISEIGLA IEAGMTAEDI AQTIHAHPTL GEITMEAAEV ALGMPIHIVK
|
|---|
| |