| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B0610 |
|---|
| Symbol | sdhA |
|---|
| ID | 7186137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 4448294 |
|---|
| End bp | 4450087 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643552416 |
|---|
| Product | succinate dehydrogenase flavoprotein subunit |
|---|
| Protein accession | YP_002448083 |
|---|
| Protein GI | 218899672 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 96 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGGA AACTTATAGT AGTCGGCGGT GGCTTGGCTG GCTTAATGGC AACGATTAAA
GCGGCAGAAG CAGGAGTGAA TGTTGAACTG TTTTCTTTAG TACCAGTAAA ACGTTCACAT
TCTGTATGTG CTCAGGGCGG AATTAACGGT GCCGTAAATA CGAAAGGTGA AGGGGATTCT
CCATGGATCC ACTTTGACGA TACAATTTAT GGTGGGGACT TCTTAGCGAA CCAACCACCA
GTTAAAGCAA TGTGTGAAGC AGCACCTGGT ATCATTCATT TAATGGACCG TATGGGTGTT
ATGTTCAACC GTACGGAAGA AGGACTTCTT GATTTCCGTC GATTTGGTGG AACACAACAT
CACCGTACAG CATTCGCTGG TGCAACAACT GGACAGCAAT TACTTTACGC ATTAGATGAG
CAAGTACGTC GTCATGAAGT AGCAGGACTT GTAACGAAAT ATGAAGGTTG GGATTTCTTA
CGAGCTGTTG TTGATGATGA AGGTGTGTGC CGAGGAATCG TTGCACAAGA CTTACAAACT
ATGGAGATTA AAAGTTTCGG AGCTGATGCC GTGATTATGG CAACAGGGGG CCCTGGTATC
ATTTTCGGAA AATCAACAAA CTCCATTATT AATACAGGTA CAGCAGCGTC TGCTGTATAT
CAGCAAGGCG CATATTATGC AAATGGTGAG TTCATTCAAA TTCACCCAAC GGCAATTCCA
GGAGACGATA AATTACGTCT TATGAGTGAA TCTGCACGTG GTGAAGGTGG ACGTGTTTGG
ACATATAAAG ATGGTAAGCC ATGGTACTTC TTAGAAGAAA AATATCCGGC TTACGGAAAC
CTTGTACCTC GTGATATCGC AACGCGTGAA ATCTTTGATG TTTGCGTAGA GCAAAAACTA
GGTATTAACG GTGAAAACAT GGTGTACTTA GATCTTTCTC ATAAAGATCC GAAAGAACTA
GATATTAAAC TTGGTGGAAT CATTGAAATC TATGAGAAAT TTACAGGTGA TGATCCTCGT
AAACTACCAA TGAAAATCTT CCCAGCTGTT CACTATTCAA TGGGCGGACT ATGGGTTGAC
TATAAGCAAA TGACGAGTAT TCCAGGTTTA TTTGCAGCAG GTGAGTGTGA TTATTCTATG
CACGGTGGTA ACCGCCTTGG TGCAAACTCA CTATTATCAG CAATTTATGG TGGTATGGTA
GCAGGACCAA ACGCAATTGA ATATATGAAA GGTCTTTCTA AATCATCAGA TGCTGTTTCG
TCTACTGTAT ATGAGCAAAA TGAATTAATC GAAACAGAGA AATTTAACAA TATTTTAACG
ATGGATGGTA ATGAAAATGC ATATGTTCTT CATAAAGAGC TTGGAGAATG GATGACAGAT
AACGTTACAG TAGTTCGTGA AAATAAAAAG TTATTAGAAA CAGATGCGAA AATTGAAGAG
TTAATGGCTC GTTACAAACG TATTAACATT AACGATACAG CGAGATGGAG TAACCAAGGT
GCTTCATTTA CACGTCAACT TGCAAATATG TTTGAGTTAG CACGTGTTAT TACAATTGGC
GCATATAACC GTAATGAGAG CCGCGGGGCG CATTACAAAC CTGAATTCCC AAATCGTGAT
GATGCAAACT TCTTAAAAAC TACGATGGCA AAATTTGAAG GAGAAGGAAA TGCACCAGCA
TTCCATTACG AAGACGTTGA TGTTTCATTA ATTAAACCAC GTAAACGTGA TTATTCTTCA
AAACATGATG TAGCTGCTAA GGGTGAAGAG AAGGGGGATA AACAACATGT CTGA
|
|---|
| Protein sequence | MKGKLIVVGG GLAGLMATIK AAEAGVNVEL FSLVPVKRSH SVCAQGGING AVNTKGEGDS
PWIHFDDTIY GGDFLANQPP VKAMCEAAPG IIHLMDRMGV MFNRTEEGLL DFRRFGGTQH
HRTAFAGATT GQQLLYALDE QVRRHEVAGL VTKYEGWDFL RAVVDDEGVC RGIVAQDLQT
MEIKSFGADA VIMATGGPGI IFGKSTNSII NTGTAASAVY QQGAYYANGE FIQIHPTAIP
GDDKLRLMSE SARGEGGRVW TYKDGKPWYF LEEKYPAYGN LVPRDIATRE IFDVCVEQKL
GINGENMVYL DLSHKDPKEL DIKLGGIIEI YEKFTGDDPR KLPMKIFPAV HYSMGGLWVD
YKQMTSIPGL FAAGECDYSM HGGNRLGANS LLSAIYGGMV AGPNAIEYMK GLSKSSDAVS
STVYEQNELI ETEKFNNILT MDGNENAYVL HKELGEWMTD NVTVVRENKK LLETDAKIEE
LMARYKRINI NDTARWSNQG ASFTRQLANM FELARVITIG AYNRNESRGA HYKPEFPNRD
DANFLKTTMA KFEGEGNAPA FHYEDVDVSL IKPRKRDYSS KHDVAAKGEE KGDKQHV
|
|---|
| |