| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B0471 |
|---|
| Symbol | rpsD |
|---|
| ID | 7184583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | + |
|---|
| Start bp | 4583111 |
|---|
| End bp | 4583713 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643552554 |
|---|
| Product | 30S ribosomal protein S4 |
|---|
| Protein accession | YP_002448221 |
|---|
| Protein GI | 218899810 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000100944 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 4.8786299999999993e-20 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTT ATACAGGTCC AGCTTGGAAA CTGTCTCGTC GTCTTGGAAT CTCTCTAAGC
GGCACAGGAA AAGAATTAGA AAAACGCCCT TACGCACCAG GTCCTCACGG TCCTAACCAA
CGTAAGAAAC TTTCAGAATA CGGTTTACAA TTACAAGAGA AACAAAAACT TCGTCACATG
TACGGCATGA CTGAGCGTCA ATTCCGTCGC ACATTTGACC AAGCAGGTAA AATGCCTGGT
AAGCACGGCG AAAACTTCAT GATCCTTCTT GAAGCTCGTC TTGACAACTT AGTTTACCGT
ATGGGCTTAG CTCGCACTCG TCGTGCAGCT CGCCAATTAG TAAACCACGG TCACATCATG
GTTGATGGCG CTCGCGTAGA TATCCCATCT TACCGTGTAA AACCTAACCA AACTATCAGC
GTTCGCGAAA AATCTAACAG CCTTGTTGTT GTTAAAGAAG CGATCGAAGT TAACAACTTC
GTACCAGAAT ACTTAACTTT CGATGCTGAC AAATTAGAAG CTACTTACAC TCGTCACGCT
GAGCGTGCTG AGTTACCAGC TGAAATCAAC GAAGCATTAA TCGTAGAGTT CTACTCTCGT
TAA
|
|---|
| Protein sequence | MARYTGPAWK LSRRLGISLS GTGKELEKRP YAPGPHGPNQ RKKLSEYGLQ LQEKQKLRHM
YGMTERQFRR TFDQAGKMPG KHGENFMILL EARLDNLVYR MGLARTRRAA RQLVNHGHIM
VDGARVDIPS YRVKPNQTIS VREKSNSLVV VKEAIEVNNF VPEYLTFDAD KLEATYTRHA
ERAELPAEIN EALIVEFYSR
|
|---|
| |