| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B0248 |
|---|
| Symbol | cspD |
|---|
| ID | 7186296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus G9842 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011772 |
|---|
| Strand | - |
|---|
| Start bp | 4785989 |
|---|
| End bp | 4786189 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643552775 |
|---|
| Product | cold shock protein CspD |
|---|
| Protein accession | YP_002448442 |
|---|
| Protein GI | 218900031 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000599312 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG GTAAAGTTAA ATGGTTTAAC GGCGAAAAAG GTTTTGGCTT CATCGAAGTT
GAAGGCGGAG AAGACGTATT CGTACATTTC TCAGCTATCC AAGGCGACGG CTTCAAAACT
TTAGAAGAAG GTCAAGAAGT TTCTTTCGAA ATCGTTGAAG GAAACCGCGG ACCACAAGCA
GCTAACGTTA CAAAAAACTA A
|
|---|
| Protein sequence | MQTGKVKWFN GEKGFGFIEV EGGEDVFVHF SAIQGDGFKT LEEGQEVSFE IVEGNRGPQA
ANVTKN
|
|---|
| |