| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3203 |
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| Symbol | |
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| ID | 7175150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 4035220 |
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| End bp | 4036929 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541740 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002437607 |
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| Protein GI | 218888286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.0987619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTGC TGCCCCGCCC GCTTTCTCCC TTCACACTGT TCCGCCAGCA CGCGGAACGC
ACCCCCATCC GCCTGCTGCT GCTGACGCTG ATGCTGCTGC TGCCCTGCGT ACTCTACGTG
GCCGACAGAT ATGCCGACAT GTGGGCGGTT CGCGCGCTGG ACGACATGGT GGCCAATGCC
AAGGCGCGGC TGGCCCTGCG CCAGCGCACG GTGAACGACG AATTCGAGTT GGCCTTTGCC
GGGCTGCGCC GCCTGCCCGA CCTGCTGGCA CAGGACGACC GCATACGTGA CGAGGCGGCG
CCAAGGCCGG AGGCGGCACC GCGCAAACAG CAGCAGGCCG ACGTGAGGCG CCGTGCCCCC
GTCAACACCT TCCTGAAGAC CTTTGCCGAA ACCATGGACC TGCACATCGC CTGGCTCATG
GACCACTCCG GCACGTGCAT CGCCACCAGC AACTACGACT CCGCGGACAG CCTGCTGGGC
ACCAACTACT CCGACCGCGC CTACTTCATC GCCGCCATGT CCGGCGAGCG TGGCCGCCAG
TTTGCCGTGG GGCGCGTTTC CAGCGTGCCG GGGTTCTTCT TCGCCTCTCC GGTGCGCCAG
TACGGCACGG TGCTGGGCGT GGTGGCCGTG AAGACCGACC TGCCCACCCT TTCGCGCCGA
CTGCGCCTGG ACGCCGCCTT CATCACCGAC GAACAGGGCG TGGTGGTTCT GGCCAACGAC
AAGACGCACA TCTTCCATGC CCTGCCGGAT GCCCCGGTGC GCGACATGCC CATATCCGCG
CGCATCCTGC GCTACAAGCG CGAGGCGTTT CCCGAGCTGT CGCTGCGCCC CTTCGTGGTG
CGGGGCATCG ACGAAAAGCA CGGGCTGACG CTCATCGGCG ATGCCACCCG CCCCGCGCTG
CTGGGGGTGA TTCATCGCCC GCAGGACGGC CTTTCGCTGC ACGTGGCCGA AGAGGTGGGC
GAAGCCCTGA GCCTGGAGGA CCGGCGGCAG GTGCGCTTCC ACTTCGCGGT GCTGTGCGGC
CTGGCCGTGC TGGGCACCCT GCTTTCCGCC GTCATCTACA CCCTGCACAA CCATTCGCAG
TTGCGCATCA TCGAGGGCAA CAACCAGGCC CTCACCCGCC TGAACGAGGA ACTGCGCCGC
ATTGCGGAAC GCGACCACCT GACCGGCTGC TTCAACCGGC GGCGGCTGGA CGAGGCCATG
AACGCCGAAC TGGCCCGCAG CGCGCGCAGC GGCCACCCGC TGGCCCTGGC CATGCTGGAC
CTTGACCACT TCAAGGCGGT GAACGACCAG CACGGCCACG GCGTGGGCGA TGCCATGCTG
GCCCACGTGA CCGAGATCAT CCGCAACCAG TTGCGCGAAC CGGACCTGCT GGCCCGCGTG
GGCGGCGAGG AATTCGCCCT GCTGCTGCCC GACACGGGCG AGCGTGAAGC CGTAACCCTG
CTGGAACGGG TGCGCCGCAA GGTGCAGGAA ACCCCGCTGC CCCATGCCGA CGGCCCCATC
CCCATGACGG TCAGCGCGGG CGTGGCCGAG TCGCGCCCGG ATATCGAACC CGGCCGCTGG
ATGCACGTGG CGGACGCGGC GCTGTACATG GCCAAGCGCT GTGGCCGCAA CCGCACGGTG
CGGGCCGCGC AGGTGCCGGA GGAAACGCTG ACGGGCGGAA GCCCGCCGCC GCACTGTGTC
ATCCTGAGTG AGCCCGGGAG CGAAGACTGA
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| Protein sequence | MPLLPRPLSP FTLFRQHAER TPIRLLLLTL MLLLPCVLYV ADRYADMWAV RALDDMVANA
KARLALRQRT VNDEFELAFA GLRRLPDLLA QDDRIRDEAA PRPEAAPRKQ QQADVRRRAP
VNTFLKTFAE TMDLHIAWLM DHSGTCIATS NYDSADSLLG TNYSDRAYFI AAMSGERGRQ
FAVGRVSSVP GFFFASPVRQ YGTVLGVVAV KTDLPTLSRR LRLDAAFITD EQGVVVLAND
KTHIFHALPD APVRDMPISA RILRYKREAF PELSLRPFVV RGIDEKHGLT LIGDATRPAL
LGVIHRPQDG LSLHVAEEVG EALSLEDRRQ VRFHFAVLCG LAVLGTLLSA VIYTLHNHSQ
LRIIEGNNQA LTRLNEELRR IAERDHLTGC FNRRRLDEAM NAELARSARS GHPLALAMLD
LDHFKAVNDQ HGHGVGDAML AHVTEIIRNQ LREPDLLARV GGEEFALLLP DTGEREAVTL
LERVRRKVQE TPLPHADGPI PMTVSAGVAE SRPDIEPGRW MHVADAALYM AKRCGRNRTV
RAAQVPEETL TGGSPPPHCV ILSEPGSED
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