Gene DvMF_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3190 
Symbol 
ID7175136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp4020594 
End bp4021241 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID643541726 
ProductNADH dehydrogenase (ubiquinone) 30 kDa subunit 
Protein accessionYP_002437594 
Protein GI218888273 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.559222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAC GCCCCGCGCA ACTGCAGGCT AAGGCTCTGC TGGACCAGCG GCTGCCCGAC 
GCGGCAGGCG CAGACATATC CTGGACCGAG GACGCCCACG GCAACATCTA CGGCTGGATC 
ATGCTGGACA ACGCCCCGCG CCTTGCGGAG CTGGCCCCGG CCATGTCCCG CTGCCGCCTG 
CGCCTGTGCA CCATGACCGC CTACGACCCG GAGCGCGACC CGGCCAACCC GCAGCGCGCC 
ATCGCCTATC ACTTCGACCT GGACGGCCTG ACCCTTACGG TCACCGCGCC GCTGGCCATG 
CCGCCCGTGG ATGACGCGGA CGAAAACGGC GAAGCGCCCG GCAGGCCCGA AGTGCCCTCC 
ATCACCCCGT GGTTCCGCAA CGCCGACTGG AACGAGCGTG AATTCATGGA GATGTACGAC 
ATCGCGGTCA CCGGCCACCC CAACCCCCGG CGGCTGTTCC TGGACGAGCG GCTGGACGCG 
GGCATCATGG GCCAGATGAT TCCCCTTTCC ACCATGATGA ACGGTGCGTC CACGCAAGAC 
CTGTGGGAGC GCATCATGTC GGCGAAGCTG CCCGAGGGCA CCTCCGTCGC CACCGGCGCC 
CCCGTCGGCG CCATCGCCAC CGTCACCGAC GAGGAGGCAC AGGCATGA
 
Protein sequence
MLTRPAQLQA KALLDQRLPD AAGADISWTE DAHGNIYGWI MLDNAPRLAE LAPAMSRCRL 
RLCTMTAYDP ERDPANPQRA IAYHFDLDGL TLTVTAPLAM PPVDDADENG EAPGRPEVPS 
ITPWFRNADW NEREFMEMYD IAVTGHPNPR RLFLDERLDA GIMGQMIPLS TMMNGASTQD 
LWERIMSAKL PEGTSVATGA PVGAIATVTD EEAQA