| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3178 |
|---|
| Symbol | |
|---|
| ID | 7175124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 4009263 |
|---|
| End bp | 4010000 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643541714 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_002437582 |
|---|
| Protein GI | 218888261 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCACC GTTCCGTCAA CCTTGCCCTG CACGTCATGA AGGACCCGGC CGCCATGGCC
GAAAAGACCG CCCAACTGCT GCTGGAACGC TGCGAACGGG CCGTGGCCGC GCGCGGCGTG
TTCACCCTGG CCCTGTCCGG CGGCAGCACG CCCATCCCGC TGTTCCGCCT GCTGGCCACC
CCGGCCTGGC TCGACCGCCT GCCGTGGGAA AAGATCGCCG TGTACTGGGT GGACGAACGC
TGCGTGGAGC CGGACAACCC GCAGAGCAAC TACGGCGTGG CCCGGCGCGA ACTGCTGTCG
CTGGCCCCGG CCACCCGCTT CTACCGCATG AAGGGCGAGA TGGATCCGGT GGAGGGCGCC
GCCGCCTACG AATCGCTGCT GCGCGAACAT TTCGACCTGG AAGACGGCGC CTGGCCGCGC
TTCGACATGG TGCTGCTGGG CATGGGCGAG GACGGGCACA CCGCCTCGCT GTTCCCCGAC
GGGACGGGCC TTGCCGAGCG CACGCGCCTG GTCATCGACC AGTACGTGCT GGCCACCAAA
AGCGACCGGC TGACCCTGAC CCTACCGGTG CTGAACAACG CCCGCTGCTG CGTGTTCCTT
GTTTCCGGCA GGGAAAAGCA CCCCGTACTG GCGCGGGCGC TGGACCTGCT GGCGGAACCC
ACCCTGCCCG CGCAGTTCGT GAAGCCCGCC AACGGGGATC TGGTGTGGAT CGTCGACGAG
GGCGCGGCCA AGGGGTAG
|
|---|
| Protein sequence | MPHRSVNLAL HVMKDPAAMA EKTAQLLLER CERAVAARGV FTLALSGGST PIPLFRLLAT
PAWLDRLPWE KIAVYWVDER CVEPDNPQSN YGVARRELLS LAPATRFYRM KGEMDPVEGA
AAYESLLREH FDLEDGAWPR FDMVLLGMGE DGHTASLFPD GTGLAERTRL VIDQYVLATK
SDRLTLTLPV LNNARCCVFL VSGREKHPVL ARALDLLAEP TLPAQFVKPA NGDLVWIVDE
GAAKG
|
|---|
| |