| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3176 |
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| Symbol | |
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| ID | 7175122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 4005518 |
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| End bp | 4008139 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541712 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002437580 |
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| Protein GI | 218888259 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA CCCTGATCAT CGCGGAAAAG CCCTCCGTCG CGCGCGAACT GGCTCCCCTT
GTGGGCGCCA CGCAGCGCCG GGCGGGCTTT CTGGAAGGGC CGGACCATCT GGTCAGCTGG
GCCGTGGGGC ATCTTGTGGG CATTGCCGAG CCGGAAGAAC AGGACCCGGC CTGGGCTGGC
CGCTGGACCC TGGACCAGTT GCCCATGCTG CCGCCGCGCT TTCGGCTGCG GGTGCTGCCG
GAAACGGCGG ACCAGTTCGC CGTGCTGCGC CGCCTGCTGA CCGACGAGCG CGTCACCGGC
GTCATCAACG CCACCGACGC CGGACGCGAG GGCGAGCTGA TCTTTCGGCG CATCTACCTG
ATGGCCGAAT GCGCGAAACC CGTGCGCCGC CTGTGGGCCA GCGACATGAC CGAAGAAGGC
CTGCGCAAGA GCCTTGCCCG CCTGCTGCCA GACGCGGAAA AGCGCAACCT GGGCCTGGCA
TCCTTTGCCC GGGCCGAGGC CGACTGGCTG GTGGGCATGA ACTATTCGCG CCTGTTCACG
GTAAGGACCG GCGGCCTCGT CTCCGTGGGG CGCGTGCAGA CCCCGGTGCT GTGCCTGCTC
ACCGCCCGCC GCCGCGAAAT CGAACAGTTC GTGCCGCAGG ATTTCTGGAC AGTTGAAGGG
GTGTTCACCC CCGGCGGCAA GGGACGCGCC GCGCAGGGCG GCGTGGCAGC ACCCGATGCG
TCACCGGACG CGACAGCCGA TGCTTCGCCC GCGGGCACAC AGGACACGCC CGCACCCGCT
TCCGACGCGC CGGACTCCTT CCCCGCCGTA TGGCACCGCC CGCCCGAACT GCGCGAAACC
CGCGTGGACA GCGAGGATGA GGCCTCGGCC ATCGCCAACG CCTGCACCGG GCGCGAAGGC
GTGGTGGAAT CGGTGGCCAG CAAGGCGGGC AGCCAGCAGC CGCCCCTGCC CTTCGACCTG
ACCACCCTGC AGCGAGAAGC CAACACCCGC TTCGGCCTGT CCGCCAAGGA CACCCTGGCC
CACGCCCAGG CGCTGTACGA AACGCACAAA CTGATCACCT ACCCGCGTAC CGATTCCCGT
CACCTGACCA AGGAGCTGTT CGCGGAAATC CTGAATCACT TCCGGGCCAT CCACCACCTG
TACCCGGACG AGACCATGCT GGCGGTCGCG CGCATCAAGT CCGGCAAGGT CAAGTTCCCC
TGCGTGGATG ACCGCAAGGT CACCGACCAC CACGCCATCA TCCCCACCGC CCGCAAGGGC
GACCCGGCCC GCCTTTCGCA GCCGGAACGG CAGATCTACG AGATGATCTG CCGCCGGTTC
ATCGCCGCCT TCTGCGCCGA GGCCAGGTTC GCCACCTCCA CCGTCACGGT GAAGGTGGGC
GAGCACGCCT TCATCGCGCG GGGCAAGGTG TTCAAGGAAA AGGGCTGGCT GGCCGTGGAA
CCGTGGCGCG CGGCGGAAGA CACCCCCCTG CCCCCCCTGC GCAAGGGTGC AAGATTGCAC
ACGGACGACA TCCGCCGGGT GACGCGCCAG ACCAAGGCCC CGGCCCACTA CACCGATGCC
TCGCTGCTGG CGGCCATGGA AACCGCCGGA AAGCTGGTGG AGGACGAGGA ACTGCGCCAG
GCCATGAAGG AACGCGGCCT CGGCACCCCC GCCACCCGCG CCCAGGTCAT CGAAACGCTG
CTCCAGCGCG GCTACGTGGG CAGGCACGGC AAGCGGCTCA TCGCCAGCGA CCGGGGCATG
CAGGTGGCCG AGGTCATTGA GGCGCTGCTG CCCGACGTGG CCTCGCCAGA GCTGACCGGC
ACGTGGGAAA AGGCCCTCAA GGACATGGAG GCGGGCACCG CCACCTACCC GCAGTTCATG
CACGGCATAC GCGAAAGCGT GTGGAACGGC GTGCACCGCA TCAAGCGGGT GGGCGGACGC
AATCTGGACC GCCTGCTGGA TACGGCGTCG GAACGCTACG CCCGCACGCC CGACGGCCTG
TGCCCCCTGT GCGGTGGCGA GGTGCGCGAA ACCCCGCGCG GCTGGGCCTG CACCGGCCAG
CCACCCGCCA AAAAACGCGG CAAGGCGGCA AACGGGGACG ACAGCGCCGG GCAGGACGCC
GCACGCGCCA AACGCGGCGC GAAAAAGACC GGCGCGCCGA ACGGCGGGCC AGACGCCGCG
CCAAACAGTG AAGCAGACGG CGGAACGCCC CCCGCCAATG GTGGCCGCTG CCCGTTTATT
CTCTGGCGCA CCTCCTTCGG GCGCGAACTG GACGAACCCA CCGCGCGCGA ACTGCTGGCC
ACCGGGCGCA CGGCGCAGGC CATGGACTTC ACCTCGCGCC AGGGCAAGCC GTTCCGGGCG
CATCTGGTGC TGAAGGGGGG CCGCCTGCGC CCCGAATTCG TACCGGACGG ACCGCGCAGG
GCTTCGGATG GCGCTTCCGC CCCGCAACAG CCGGAAGAAA ACACGCAGCC CGCCGGCAAT
GCCGCCCCCG GCACGTCCAA TGCGGCGGGC ACGCCCGGCT CACTGGGCAC GCCAGGCGCG
CCAGGCGCAT CCGGTGCATC AGGCGTAGCT GGTGAACCGG ACGAACCGGA CGAACCGGCC
GAACGGGGCG AACAGGATAC GCCCGGCAGC GACGACATCT AG
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| Protein sequence | MSKTLIIAEK PSVARELAPL VGATQRRAGF LEGPDHLVSW AVGHLVGIAE PEEQDPAWAG
RWTLDQLPML PPRFRLRVLP ETADQFAVLR RLLTDERVTG VINATDAGRE GELIFRRIYL
MAECAKPVRR LWASDMTEEG LRKSLARLLP DAEKRNLGLA SFARAEADWL VGMNYSRLFT
VRTGGLVSVG RVQTPVLCLL TARRREIEQF VPQDFWTVEG VFTPGGKGRA AQGGVAAPDA
SPDATADASP AGTQDTPAPA SDAPDSFPAV WHRPPELRET RVDSEDEASA IANACTGREG
VVESVASKAG SQQPPLPFDL TTLQREANTR FGLSAKDTLA HAQALYETHK LITYPRTDSR
HLTKELFAEI LNHFRAIHHL YPDETMLAVA RIKSGKVKFP CVDDRKVTDH HAIIPTARKG
DPARLSQPER QIYEMICRRF IAAFCAEARF ATSTVTVKVG EHAFIARGKV FKEKGWLAVE
PWRAAEDTPL PPLRKGARLH TDDIRRVTRQ TKAPAHYTDA SLLAAMETAG KLVEDEELRQ
AMKERGLGTP ATRAQVIETL LQRGYVGRHG KRLIASDRGM QVAEVIEALL PDVASPELTG
TWEKALKDME AGTATYPQFM HGIRESVWNG VHRIKRVGGR NLDRLLDTAS ERYARTPDGL
CPLCGGEVRE TPRGWACTGQ PPAKKRGKAA NGDDSAGQDA ARAKRGAKKT GAPNGGPDAA
PNSEADGGTP PANGGRCPFI LWRTSFGREL DEPTARELLA TGRTAQAMDF TSRQGKPFRA
HLVLKGGRLR PEFVPDGPRR ASDGASAPQQ PEENTQPAGN AAPGTSNAAG TPGSLGTPGA
PGASGASGVA GEPDEPDEPA ERGEQDTPGS DDI
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