Gene DvMF_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3172 
Symbol 
ID7175118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3999603 
End bp4001006 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content69% 
IMG OID643541708 
ProductUTP--glucose-1-phosphate uridylyltransferase 
Protein accessionYP_002437576 
Protein GI218888255 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4284] UDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.260882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCACCG TTCCCCTGCA GCCCTTTGCC ACCAAGATGG CCCGCGCCGG TCTGCCTTCC 
CCGCTGGTGG CGCTGTTCGC CTCCTATCTG GAGGAACTGG CCTGCGGCAG CACCGGACTG
ATCCCCGAGT CGGACATCCT GCCTGTGGGC CGCGACGACC TGCCGCTGCT GGACGACCTG
GCCCCCTACG CCGCCATCGG GCGCGCCCGC CTGCGCGAGG CCGCCTGCAT CAAGCTGAAC
GGCGGCCTTG GCACCAGCAT GGGCATGACC CACGCCAAGT CGCTGCTGCC CGCCAAGGAC
GGGGCCACCT TTCTCGAACT CATCGTGCGC CAGGCCGAGC ACCAGCGCCG TACCCACGGC
GGACCATCGC CCCTGCTGTT CATGAACAGC TTCTCCACCC ACCAGGACAC CCTGCGCGCG
CTGGACGTGC TGGGCCTGCA ACATGCCGGC AGGCCGGGCA CCTTCCTGCA GCACCGCTTT
CCCAAGGTGT CCCGGGCAAC CCTGCTGCCC GTGGAGTACC CGGAAAACCC GGACCTGGAA
TGGAACCCGC CCGGCCACGG CGACCTGTAC GCCGCCCTGG CCCTGTCCGG GCATCTTGCC
CGGCTGCTGG AATCGGGCCG ACGCTACGCG CTCATCTCCA ACGCGGACAA TCTGGGCGCC
ACGCTGGACC CGGCCATTCT CGGCTACCTC ATGGAAGAGG ACATCCCCTT CCTGATGGAA
TGTGCGCCGC GCACCCCGTC CGACCGCAAG GGCGGCCACC TGGCCCGCTC GCGCCACGGG
GGGCTGGTGC TGCGCGAACT GGCCCAGTGC CCGGACGATG ATCTGCCCCG GTTCCAGGAC
ATCGTGCGGT ACGGACTGTT CAACACCAAC AACATCTGGC TGGACCTGCG CGCCCTGCGC
CAGCACATCG ACGAATACGG CCTGCTGCGC CTGCCCATGA TCCGCAACCC CAAGACCGTG
AACCCCCGCG ACCCCGATTC GGAAAAGGTC TGGCAGGTGG AAACGGCCAT GGGCGCGGCC
ATCTCGCTGT TCCCCAGGGC GCGGGCCATC GTCACCCGGC GCGAACGCTT CCTGCCGGTG
AAAAAATGCA GCGACCTGCT GGTGCTGTGG TCCGACCGCA CCCTGCTGGA ACCCGGCGGG
CACGTGCGGC CCAACCCCGC CTGCACCACC CCCGGCGTGC TGGTGGAACT GGATGGTGCG
CACTATGGCA CGTGGGACCG GCTGATGGCC CGTTTTCCGC ACGGGGCGCC ATCTCTGCTG
CACTGCGATG CACTGGCCGT GCACGGCGAT GTGCTGTTCG GCGGCAACGT CACCGCGCGC
GGGCGGGTGG TGGTGCGCAA CCCCTCCTGC ATGCAGGCCG TCATTCCCCA CGGAACGGTG
CTGGAAGGCG ACGTGAACCT GTAA
 
Protein sequence
MCTVPLQPFA TKMARAGLPS PLVALFASYL EELACGSTGL IPESDILPVG RDDLPLLDDL 
APYAAIGRAR LREAACIKLN GGLGTSMGMT HAKSLLPAKD GATFLELIVR QAEHQRRTHG
GPSPLLFMNS FSTHQDTLRA LDVLGLQHAG RPGTFLQHRF PKVSRATLLP VEYPENPDLE
WNPPGHGDLY AALALSGHLA RLLESGRRYA LISNADNLGA TLDPAILGYL MEEDIPFLME
CAPRTPSDRK GGHLARSRHG GLVLRELAQC PDDDLPRFQD IVRYGLFNTN NIWLDLRALR
QHIDEYGLLR LPMIRNPKTV NPRDPDSEKV WQVETAMGAA ISLFPRARAI VTRRERFLPV
KKCSDLLVLW SDRTLLEPGG HVRPNPACTT PGVLVELDGA HYGTWDRLMA RFPHGAPSLL
HCDALAVHGD VLFGGNVTAR GRVVVRNPSC MQAVIPHGTV LEGDVNL