| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3165 |
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| Symbol | |
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| ID | 7175111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3991789 |
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| End bp | 3992445 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643541701 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_002437569 |
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| Protein GI | 218888248 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.0461052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAATAC CCGTGGTCAG GAACGTGCTG GAAGCCAACG ACAAGATGGC CGTGCAACTG
AAAAGCCTGT TTGCCCGGCA CGGCATTCTG GTCCTGAACA TGATCAGTTC GCCCGGCGCG
GGCAAGACCT CGGTGCTCGA GCGCACCCTG TCCGACCTGC GCGGCGAGTT CCGCATGGCG
GTCATCGAGG GCGACCTGCA AACCGACAAC GACGCCCGCC GCGTGGCCGC CACCGGCGCC
AAGGCCGTGC AGATCAACAC CGACGGCGGC TGCCACCTGG ACAGCAACAT GATTCTCGAG
GCGCTGTCCA ACTTCGACCT CGCGGAAATC GACATCCTGT TCATCGAGAA CGTGGGCAAC
CTGGTCTGCC CGGTGGAGTT CGACTGCGGC GAAGACCACA AGGTGGCCCT GCTCAGCGTG
ACCGAGGGCG ACGACAAGCC CGAGAAGTAC CCGCTGCTGT TCAATCTTTC CAAGGTGATG
CTGCTGAACA AGGTGGACCT GCTGCCCTAC GTGGACTTTG ACGTGGAGCG GGCCAAGCGC
TTTGCCACGC ACCTGAACAA GGAACTGACC ATCTTCCCCA TGTCCTGCCG CAGCGGCGAA
GGGCTGGAAG GCTGGTACGA CTGGCTGCGC ACCGCGCGGG CCGCCAAGCG CGGGTAG
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| Protein sequence | MEIPVVRNVL EANDKMAVQL KSLFARHGIL VLNMISSPGA GKTSVLERTL SDLRGEFRMA
VIEGDLQTDN DARRVAATGA KAVQINTDGG CHLDSNMILE ALSNFDLAEI DILFIENVGN
LVCPVEFDCG EDHKVALLSV TEGDDKPEKY PLLFNLSKVM LLNKVDLLPY VDFDVERAKR
FATHLNKELT IFPMSCRSGE GLEGWYDWLR TARAAKRG
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