Gene DvMF_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3162 
Symbol 
ID7175108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3987613 
End bp3988965 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content70% 
IMG OID643541698 
ProductSmr protein/MutS2 
Protein accessionYP_002437566 
Protein GI218888245 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0140456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CCCGTGACGA CGATTTCGAC AGCGCCAACC CGTTCCGCTC GCTGGACAAG 
CGCGCCTTCC GCGATGCCCG CGCCCAGAAG GGCGCAGTGC CTGCCTCCAA GGCAGGCCCA
CGGCCTCACG GGCAGGCCGG ACAGGCCAGA CAGGGCACTC AGGGCAATCA GGGAGCGCAC
AAGGCTCCCC AGCGCGCCGG CAGCGGCGCC AGACCTGCCG GACCGGGCAA CGCCCCGTCC
GCGCAGTCCC TCCTGACCGA GGAAGATGCC GAGGCCTTCA TGTCGGCCAT GGGCGCCGTG
CAGCGGCTGG ATGCGCCGAA GAAGCCCGGC AAGGGCAAAC CGCAAGGACA CGCAAACCGG
AATACGGCCC CTGTTGCGGC AGTGCTGGAA ACGCCCGCGC CGCCTCTGGT CGCCAACACT
CCGGCGTCCC CCCGCCCCGG TGGCGAGCAG CCCACCCGCC TCGCCGCACC AACATCAACG
GTGCGCGCCG CCGAACGCGA CAAGCTGGCG CCGAACACGG CGGCCAGACT GGACGCGGAC
GCGGGCCGCA ACGGCTTTTC CCTGCAGGAC CAGCCGGGAT TCCGGCGGCT GCTGGAACAC
GCGGAGGGCA CCCCCATAGC GGAAAACACC CCTGCCGCGT CACCACCTGC CCCCCCTGTC
GCGGCACCCT CCGGCAAGCC CGATGCCGTG CCCGTCACCG CCTCCGAACG CAAGGAGGCG
GTACGCCAGC ATTCGCGGCA GGCCGTGACC GATCATGATC ACACCCCGCC CCCGGACGAG
GACAACCTGT TCACCAAGGC CATGTCCGGC GTGCGCACGC TGGCGGGCAA GGGCCGCGAA
GTGCCGCCGG AAACCGCCCC GCGCGAGGCC GCCGCGCCCG CCGTGGGCCA CCCGTTGCAG
GACTTCATGG ACGGAACGGT TGAATTCGCG CTGGAATTCA CCGACGAATA CCTGGAAGGC
CACGTGGTGG GGCTGGATGC GCTGACCGTG GGCAAGCTGC GCGCCGGGCA GTACAGCCCG
GAAGGCCACC TGGACCTGCA CGGCATGAAC GCCCTGCAGG CCTACGAGGC CATGATCGGC
TTCATGCGCG CGGCCTACCA CAAGGGCATG CGCACCGTGC TGGTCATACC GGGCCGGGGC
AAAAACTCGC CCGACGGCAT GGGCGTGCTG CGAGAAAAGG TGCAGGCCTG GCTGACGCAC
GACCCCTTCA AGCGGGTGGT GCTGGCCTTC TGCACGGCCC AGCCCACGCA CGGCGGCGCG
GGGGCGCTGT ACGTGCTGCT GCGCAAGTAC AAGAAGTCGC GCGGCAAGAT CCAGTGGGAC
CGCACGCCGA CAGACGCCGA CCTGTTCCTG TAG
 
Protein sequence
MADTRDDDFD SANPFRSLDK RAFRDARAQK GAVPASKAGP RPHGQAGQAR QGTQGNQGAH 
KAPQRAGSGA RPAGPGNAPS AQSLLTEEDA EAFMSAMGAV QRLDAPKKPG KGKPQGHANR
NTAPVAAVLE TPAPPLVANT PASPRPGGEQ PTRLAAPTST VRAAERDKLA PNTAARLDAD
AGRNGFSLQD QPGFRRLLEH AEGTPIAENT PAASPPAPPV AAPSGKPDAV PVTASERKEA
VRQHSRQAVT DHDHTPPPDE DNLFTKAMSG VRTLAGKGRE VPPETAPREA AAPAVGHPLQ
DFMDGTVEFA LEFTDEYLEG HVVGLDALTV GKLRAGQYSP EGHLDLHGMN ALQAYEAMIG
FMRAAYHKGM RTVLVIPGRG KNSPDGMGVL REKVQAWLTH DPFKRVVLAF CTAQPTHGGA
GALYVLLRKY KKSRGKIQWD RTPTDADLFL