Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3162 |
Symbol | |
ID | 7175108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3987613 |
End bp | 3988965 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643541698 |
Product | Smr protein/MutS2 |
Protein accession | YP_002437566 |
Protein GI | 218888245 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.0140456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA CCCGTGACGA CGATTTCGAC AGCGCCAACC CGTTCCGCTC GCTGGACAAG CGCGCCTTCC GCGATGCCCG CGCCCAGAAG GGCGCAGTGC CTGCCTCCAA GGCAGGCCCA CGGCCTCACG GGCAGGCCGG ACAGGCCAGA CAGGGCACTC AGGGCAATCA GGGAGCGCAC AAGGCTCCCC AGCGCGCCGG CAGCGGCGCC AGACCTGCCG GACCGGGCAA CGCCCCGTCC GCGCAGTCCC TCCTGACCGA GGAAGATGCC GAGGCCTTCA TGTCGGCCAT GGGCGCCGTG CAGCGGCTGG ATGCGCCGAA GAAGCCCGGC AAGGGCAAAC CGCAAGGACA CGCAAACCGG AATACGGCCC CTGTTGCGGC AGTGCTGGAA ACGCCCGCGC CGCCTCTGGT CGCCAACACT CCGGCGTCCC CCCGCCCCGG TGGCGAGCAG CCCACCCGCC TCGCCGCACC AACATCAACG GTGCGCGCCG CCGAACGCGA CAAGCTGGCG CCGAACACGG CGGCCAGACT GGACGCGGAC GCGGGCCGCA ACGGCTTTTC CCTGCAGGAC CAGCCGGGAT TCCGGCGGCT GCTGGAACAC GCGGAGGGCA CCCCCATAGC GGAAAACACC CCTGCCGCGT CACCACCTGC CCCCCCTGTC GCGGCACCCT CCGGCAAGCC CGATGCCGTG CCCGTCACCG CCTCCGAACG CAAGGAGGCG GTACGCCAGC ATTCGCGGCA GGCCGTGACC GATCATGATC ACACCCCGCC CCCGGACGAG GACAACCTGT TCACCAAGGC CATGTCCGGC GTGCGCACGC TGGCGGGCAA GGGCCGCGAA GTGCCGCCGG AAACCGCCCC GCGCGAGGCC GCCGCGCCCG CCGTGGGCCA CCCGTTGCAG GACTTCATGG ACGGAACGGT TGAATTCGCG CTGGAATTCA CCGACGAATA CCTGGAAGGC CACGTGGTGG GGCTGGATGC GCTGACCGTG GGCAAGCTGC GCGCCGGGCA GTACAGCCCG GAAGGCCACC TGGACCTGCA CGGCATGAAC GCCCTGCAGG CCTACGAGGC CATGATCGGC TTCATGCGCG CGGCCTACCA CAAGGGCATG CGCACCGTGC TGGTCATACC GGGCCGGGGC AAAAACTCGC CCGACGGCAT GGGCGTGCTG CGAGAAAAGG TGCAGGCCTG GCTGACGCAC GACCCCTTCA AGCGGGTGGT GCTGGCCTTC TGCACGGCCC AGCCCACGCA CGGCGGCGCG GGGGCGCTGT ACGTGCTGCT GCGCAAGTAC AAGAAGTCGC GCGGCAAGAT CCAGTGGGAC CGCACGCCGA CAGACGCCGA CCTGTTCCTG TAG
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Protein sequence | MADTRDDDFD SANPFRSLDK RAFRDARAQK GAVPASKAGP RPHGQAGQAR QGTQGNQGAH KAPQRAGSGA RPAGPGNAPS AQSLLTEEDA EAFMSAMGAV QRLDAPKKPG KGKPQGHANR NTAPVAAVLE TPAPPLVANT PASPRPGGEQ PTRLAAPTST VRAAERDKLA PNTAARLDAD AGRNGFSLQD QPGFRRLLEH AEGTPIAENT PAASPPAPPV AAPSGKPDAV PVTASERKEA VRQHSRQAVT DHDHTPPPDE DNLFTKAMSG VRTLAGKGRE VPPETAPREA AAPAVGHPLQ DFMDGTVEFA LEFTDEYLEG HVVGLDALTV GKLRAGQYSP EGHLDLHGMN ALQAYEAMIG FMRAAYHKGM RTVLVIPGRG KNSPDGMGVL REKVQAWLTH DPFKRVVLAF CTAQPTHGGA GALYVLLRKY KKSRGKIQWD RTPTDADLFL
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