Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3158 |
Symbol | |
ID | 7175104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3982747 |
End bp | 3984048 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643541694 |
Product | carboxyl-terminal protease |
Protein accession | YP_002437562 |
Protein GI | 218888241 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.0549247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTGA CGCTGTGGAC GGCCACGCTG CTCATTCTTG GCGTGCTCGC CATTTCCGGC GGGGCGGCGC TGGTGCCCGA CACCGTCGGT GCAGCCAGTG AGGAAGGCAA ATACGACTCG CTGAAGCGCT TCAGCCAGGT GCTCGACCTG GTGGAGCGCT ATTACGTGCG CGACGTGCCC CGCAAGGACC TGATCAACGG GGCCGTCAAG GGCATGCTGC AAGGGCTGGA CCCCCATTCG ACGTTCCTGT CGGTGGAGGA GTTCAAGGAG ATGCAGGAAA GCACCTCCGG CGAATTCTTC GGCATCGGCA TCGAAATTTC CAGCGAGAAC GGCCAGCTCA TCGTGGTGGC CCCCATCGAG GACACCCCCG CCCACAAGGC GGGCCTGAAG AGCGGCGACA TCATCCTTGC CGTGGACGGC GTGCCCACCC AGGACATGAC CACCCAGGAA GCGGTCACCC GCATCCGTGG CGCCAAGGGC ACCGAAGTGG AGCTGTCCAT CCTGCACCGC GACGCCAAGG CCCCCGAAGT GGTGCGCCTG GTGCGCGACG CCATTCCGCT CATCAGCGTC AAGTCCAAGA TGCTCGAGGA CGGCTACCAC TGGGTGCGCC TGACCCGCTT CAGCGAACGC ACCACCGGTG AACTGGTGGA CGCGTTGAAG GAAGCCAACA AGAAGGGCAT GAAGGGCATC ATCCTCGATC TGCGCAACAA CCCCGGCGGG TTGCTGGACC AGGCCGTGAG CGTGTCCGAC ACCTTCCTGA AGGACGGGGT CATCGTGTCT ATCCGTGGCC GCATGGAAGA CGCCAGCCGG GAATACCGGG CCAAGGCCCA GCCCGGCGAC GTGACCGTGC CCATGGTGGT GCTGGTCAAC GCCGGTTCCG CCTCGGCCTC GGAAATCGTG GCCGGTGCCC TGCGTGACCA CAACCGCGCG CTCATCCTGG GTGAACGCAC CTTCGGCAAG GGTTCGGTGC AGAACGTCAT CCCGCTGTCC GACGGCGCGG GCCTGAAGCT GACCGTGGCC CTGTACTACA CGCCTAATGG CCGCTCCATC CAGGCGGAAG GCGTGGAGCC CGACTTCGAG GTGCCTTTCG AACTGCCGCG CGAGGAAGAA AAGGCCCACC GCCTGAACAT GGTGCGCGAA AAGGATCTGA ACCGCCACCT CGAGAACGGT TCTTCCGGCA AGGATGCGCG TCCTTCGGCC AAGGCCGCGG ACGACGTGAA GCAGGCCCTG GAAAAGGACA ACCAGCTGCG CATGGCGTTG CAGTTCGTGA AGCGCCTGCC CCGCCTCAAG GATATCCAGT AG
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Protein sequence | MRVTLWTATL LILGVLAISG GAALVPDTVG AASEEGKYDS LKRFSQVLDL VERYYVRDVP RKDLINGAVK GMLQGLDPHS TFLSVEEFKE MQESTSGEFF GIGIEISSEN GQLIVVAPIE DTPAHKAGLK SGDIILAVDG VPTQDMTTQE AVTRIRGAKG TEVELSILHR DAKAPEVVRL VRDAIPLISV KSKMLEDGYH WVRLTRFSER TTGELVDALK EANKKGMKGI ILDLRNNPGG LLDQAVSVSD TFLKDGVIVS IRGRMEDASR EYRAKAQPGD VTVPMVVLVN AGSASASEIV AGALRDHNRA LILGERTFGK GSVQNVIPLS DGAGLKLTVA LYYTPNGRSI QAEGVEPDFE VPFELPREEE KAHRLNMVRE KDLNRHLENG SSGKDARPSA KAADDVKQAL EKDNQLRMAL QFVKRLPRLK DIQ
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