| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3154 |
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| Symbol | |
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| ID | 7175100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3978723 |
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| End bp | 3979412 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643541690 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002437558 |
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| Protein GI | 218888237 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.0975784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTGGG ACGTCGTCTG GAGAAATTTC GATTACCTGC TCGTGGGCTC GTGGCCGCAG
GGGCCGCTGG GCGGTCTTGC CATGAGCGTG GTGCTGGCCA TTGGCGGCAT CTTCGGGGCG
TTCTGGCTGG GCCTTGGCTT TGGCCTGCTG CGCCTGTCGG ATCGCTGGTG GCTGCGCCTG
CCCGCCATCA TCTACGTTGA AATCATCCGC GGCATCCCGC TGCTGATGCT GATTTTCTGG
TTCTATTTCC TGGCGCCCAT CGTGCTTGGC CGTACCCTGC CAGAGGCGGA GAGCGCCCTT
GTGGCCTTCA TCGTGTTCAC CGGCGCCTAC ATCGCCGAAA TCGTGCGCGC CGGGGTGCTT
GCCCTGCCGC ACGGCCAGAT GGAGGCCGCG CGCGGCACCG GGCTTTCCAA GAGCCAGGCC
ATGATCTACG TCATCCTGCC GCAGGCCCTG CGCAACATGA TTCCTTCGTT CGTGAACCAG
TTCGTCAGCT TGACCAAGGA CACCTCGCTC GCCTACATCA TCGGCGTTTC CGAACTTACC
CGCACGGCCA CCCAGATCAA CAACCGCGAG CTGACCGCTC CGGCGGAACT CTTCTTCACC
ATCGCCGTGC TGTACTTCAT CGTCTGCTGG ACCCTGACCG CCGCAAGCCG GCGCATGGAA
CGGCAGATGG CCCGATACCA GGCAAGGTAA
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| Protein sequence | MQWDVVWRNF DYLLVGSWPQ GPLGGLAMSV VLAIGGIFGA FWLGLGFGLL RLSDRWWLRL
PAIIYVEIIR GIPLLMLIFW FYFLAPIVLG RTLPEAESAL VAFIVFTGAY IAEIVRAGVL
ALPHGQMEAA RGTGLSKSQA MIYVILPQAL RNMIPSFVNQ FVSLTKDTSL AYIIGVSELT
RTATQINNRE LTAPAELFFT IAVLYFIVCW TLTAASRRME RQMARYQAR
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