Gene DvMF_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3127 
Symbol 
ID7175073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3947915 
End bp3948535 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID643541663 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002437531 
Protein GI218888210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.255476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA GCTCCCTGAC CATGAATCCG CTGGACGGTG GCCGCAAGCT GGTGCTTCTG 
GCCGTATGCG TTGGCCTGGC CGCCATGCTG GGTTCCTCGT TCCTGTACCG CCTGTCCAAC 
CCGTCGCTGG TGCAGCAGGG CCGCGAGCCC GCCGCGCAGG AGGAAGGGGA ACACGCGGGC 
GAGATGGAAG TGGTCTCCGC GCTGATGCAG AAGGTGCAGC AGAACCCCAC CGACGCGGGC 
GCCCTGTTCG CCCTTGGCCA GCACTTTCTG GACCACGCCG ACTGGGCGCG CGCCGAAAGC 
TTCCTGGCCC GCGCCGTGGT GGCCTCTCCG GCGGACCCGC AGCCGCTGTA CATGCTGGGC 
ATCGCCCAGT ACCAGCAGCA GTCTTTCGAC AAGGCGGCGG AAACCTTCGA GCGGCTCATC 
GAAATCGATC CCCAGCCCGC CGCGCGCTAC AACCTGGGCA TCCTGTACCG CCACTACCTG 
AAGGCCGAAG CCAAGGGCAA CGCCCACCTC AAGGCCATCA TCGAAGACGC CAAGGCCCCG 
GAAGACCTCA AGGCGCAGGC CCGGCAGGAA CTTGAATCCG CCGTGCACGG CGACAAGAAG 
CAGCAGGACA AGAAGCAGTA G
 
Protein sequence
MTNSSLTMNP LDGGRKLVLL AVCVGLAAML GSSFLYRLSN PSLVQQGREP AAQEEGEHAG 
EMEVVSALMQ KVQQNPTDAG ALFALGQHFL DHADWARAES FLARAVVASP ADPQPLYMLG 
IAQYQQQSFD KAAETFERLI EIDPQPAARY NLGILYRHYL KAEAKGNAHL KAIIEDAKAP 
EDLKAQARQE LESAVHGDKK QQDKKQ