Gene DvMF_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3114 
Symbol 
ID7175060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3927746 
End bp3930994 
Gene Length3249 bp 
Protein Length1082 aa 
Translation table11 
GC content74% 
IMG OID643541650 
Producthypothetical protein 
Protein accessionYP_002437518 
Protein GI218888197 
COG category 
COG ID 
TIGRFAM ID[TIGR02455] trehalose synthase, Pseudomonas stutzeri type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.000894612 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCGAACC GCGCCGCGCT CCGCACCATT GCCCTGATGC TCCGCAGCCT GCCCGCAATC 
CGTCCGCAAT CCGGCCTGCC GCGCGCCGCT GCCGCGCCCA GCCGTTCGGC CATCCAGCCC
GCCGCCCCTG TTCCGGGCAT GGTACTGCAC CTGGTACTGA GTCTGGCCCT CGGCCTGCTC
CTGACAGGGT GCGGGGCTCC TCCGGCCAAA CAGAAATCGT TGCTGTTGCC GCAAGGCCCC
TCGGTCACCC GGGCGGACCC CGGCTACATG CAGTGGCTGG AAAAGCAGTC GCTGCTGGGG
GCCGGGGCGG AACTTTCGCG CGTGGTCTCC GGCAGCCAGC TGGGCTGGCG CTCTCCTTCG
CTGCCGCCCG ACCCGGACAA CCTGCTGCGC GCCGCCGATA CCTGGCTGCT GGTGCACCCC
ATGGCGCTCA TCGCCGACGG CACGCCTTCG GCCTTCGCCA TCCTGGCCCA GCCCAGAACG
CAGGAACTGC TGCGCCGCAC GGGCGCGCGC GGGCTGTACG TCGCCCCCTC CGGCGGCGCC
GGGGCCATCT GGGCCTACGA CCGCAGCGCC ACCCTGACCG GCGACGACAC CATCCAGCAC
GGCTTTTCCG AGGCGGCGGG CACGGACGAC GAATACCTGC GTCTGCGCCG CCTGACCGAC
AACAACCGCA TGCTGCTGGG CACCGACATC ATCCCCGCCG CCACCGGCAT GGGACCGGAC
TTCTTTCTGG CCGCGCGCAA CGTGCGCGAA TACCCCGGCG CTTACTGCCT GGTGGAAATC
CCGCGCGACC TGTGGCCTTA CATGCCCGCC AGTTCGTCGG AATGGCAGGC CCGCCCGCTC
ACCCGCGCCC AGCATGACCT GCTGGCGGAA AAGGGACTGC TGCCCGCCTC CCTCTCGCGC
GACCTGCTGT CGTGGGCGCG GCCCGGCGGC TGGGCCGTCA CCGGAGAGGT TCGCGGGTCC
GACGGCACCC TGCGCCGCTG GGTCTACCGC CATGCCGGGC GCTACGACAT GCCAGTGCTG
CACTGGGACG ACCCTTCCGC CGCCGCACGG CGCATCCTGT CTTCCAGCAT CATCCAGCAG
ATCGGCCTGC GCGGCATGGC CCTGACCGGC TTCCGGGTGG AACCCCTGAC AGGGCTGGAC
CCGCTGCCCC GCACCGCCTA CGGCGACCAG GGCCATGCCC CGGCCCTGGA ACCGGCCCCC
ACCGCCGCCC TGTCACTGGC CCGCGAAACG CGCCGCTACG GCGGCTGGGC CTGGCAGCGC
GACAGGCTGC CCCTGCCGCT GCTGGCCCGC ACCCTGCACG AATCCGCCGA CGTGGCCGAA
GACACCGTCA CCAGCCCTGC CGCCGAACAC GCCCTGCTCA CCGGCGATGC GCGCCCCCTG
CGCGCCCTGC TGGACGACGC CCTGCGCCTT GGCATCGACA TGCGCCGCCT GGTGCATGCC
ACCCCCGGCC CGGACGGCGT GGACTACGCC CTGCCGCAAC TGTCCCCCGG CATGCTGCCG
CCCGGCGCGG CGGCGGGCGA TGCCGCCCTG GCGGACGACA TGCGCGCGGC CATGCGCACG
CGCGCGGCCC TGTGGGCGTC CACCATGCCG CTGGGCGGGG CGGGCGACGT GCTGCCCGTC
ACCGGCGCGG GGCTTGCCGC GCTGGGCGCT GGCTTCAGCC ATGCCGACGC CGCCAGGGCC
GACGCGCGCG AAACGATCCG CCAGGGGCAT CTGGCCCTGG TCTTCTTCAA GGCCATGCAG
CCGGGCCTGC TGGTGCTGCA CGGGCAGGAC CTGGCGGGCG CCCTGCCGCT GGACTGGCAC
GTCATGGCCG ATTCCGAGGA CCGCTGGGAC CCGGCGCTGG CCCCGCGCGG CGCGTACGCC
CTGTACCGCA CCGCCCGCAC CACCGTGCTG ACCAAGCAGG GCATGCCCCG CGCCCCGGTG
GCCTACCCCA CACCCGACGA GCAACTGCAC GACCCGCATT CGTTCCTCAA CGGGGTGCAC
GCCATTACCG CCATGCGCGA ACGCACCGGC ATTGCCGCCG GGCGCGTGGC CGCGCGCCTG
CGCACGCAGG GACGCGGCTG CATCGCCCTT GCCGTGGAAC TGCCCGGTGG GCGCGGCGTG
GTGGTGGCGG TCACCAACTT CGGGCGCGAG GCAGTGACCG AACGGCTGGA CATGGCCGCC
ACGCCCAAGC TTCTGGAACT GTTCGGCGCG GGCAACCCCG CCGTGGACCT GGAGGAAGGC
ACCCCGCTGC CGCTGGATGG TGGCCGCATG GTGCTGCATC TGAACCCGTG GGAAACCCGC
GCCATCCTTG TGGGGCGCGA TGCCAAGTCC ATCGGCGCGG CAACGGCGGC GGAACAGCCC
AAGGGGCCGT TCGTGCCCGC CCGCGACGCC ACGCCCATGC CCGTGGTCGC GCCACCCGCA
CCGGCCAAGT CGGCGGTGGC GCCCCCGGCT CCGGCGCCCG TGCCGGACCT GACCATCCGC
ATCGCACCGC CCGCCGGGGC CGAAGCCAGC CCCGTGCCCG CAGCCCCGGA AGGGATGCCC
GCCGAAACTC CGGCCACCAG CGGCGACGCG GCGGCAATGC CCGGCGTGCC GCCCACCGTG
GCCCCCGCCG CTGCTCCTGA AGCGCAACCT GCCACGCCGC CGATGGAACC GACCCCCACG
GAGCAGGTGC CCCTGCCCCC GGCCACCGAG CCGGTCAGGA TTGACTCCCT TGGGCTTGAA
CCCGTTGGAG GTGAACCGGC CCCATCGGTG CCGGTGGCCC CCACGCCCGC CCAGATGCAG
GAATCGCAGC CCGTGCCGCC CGCCGTGCCG CCCAGCTTGC CTCATGACGC GGGCGGCGAG
GTGCGCGCGC CGGTCACGCC CCCGGAAATC CCGGCACTGC CGGAACCCGT GGCGCCCCCC
GCGTACCCCG CGACTCCGGA GGTAACGGCC CCGGCAACGG AATCCACCGC CCCGCCACTC
CTGACGCCCA CGGCGCCCGC TGATGGCACT GACGGCGGCC TCGTTCCCTA CAAGTCGGCA
CGACGCACCG CGCCGGAAAC ATTGGACGGC CCGATCGTTC CCATTCCCCC GGCGTCCACC
GCCCTGCCCG GCGGGACCGA CGTCCCGACG GACGGCACGA CCACCTACAA GGCCCCCCTG
CGCAGGGCCC CGGAAACGCT GGACGCCCCC ATCACGGTGC CGCCGCTGCC CACGCCTCCG
GCACCGCCCG CCGAACCGGT GACACCACCG AACCCGGCGT CAACGGAATC GGGAACCGCC
GCGCCCTAG
 
Protein sequence
MPNRAALRTI ALMLRSLPAI RPQSGLPRAA AAPSRSAIQP AAPVPGMVLH LVLSLALGLL 
LTGCGAPPAK QKSLLLPQGP SVTRADPGYM QWLEKQSLLG AGAELSRVVS GSQLGWRSPS
LPPDPDNLLR AADTWLLVHP MALIADGTPS AFAILAQPRT QELLRRTGAR GLYVAPSGGA
GAIWAYDRSA TLTGDDTIQH GFSEAAGTDD EYLRLRRLTD NNRMLLGTDI IPAATGMGPD
FFLAARNVRE YPGAYCLVEI PRDLWPYMPA SSSEWQARPL TRAQHDLLAE KGLLPASLSR
DLLSWARPGG WAVTGEVRGS DGTLRRWVYR HAGRYDMPVL HWDDPSAAAR RILSSSIIQQ
IGLRGMALTG FRVEPLTGLD PLPRTAYGDQ GHAPALEPAP TAALSLARET RRYGGWAWQR
DRLPLPLLAR TLHESADVAE DTVTSPAAEH ALLTGDARPL RALLDDALRL GIDMRRLVHA
TPGPDGVDYA LPQLSPGMLP PGAAAGDAAL ADDMRAAMRT RAALWASTMP LGGAGDVLPV
TGAGLAALGA GFSHADAARA DARETIRQGH LALVFFKAMQ PGLLVLHGQD LAGALPLDWH
VMADSEDRWD PALAPRGAYA LYRTARTTVL TKQGMPRAPV AYPTPDEQLH DPHSFLNGVH
AITAMRERTG IAAGRVAARL RTQGRGCIAL AVELPGGRGV VVAVTNFGRE AVTERLDMAA
TPKLLELFGA GNPAVDLEEG TPLPLDGGRM VLHLNPWETR AILVGRDAKS IGAATAAEQP
KGPFVPARDA TPMPVVAPPA PAKSAVAPPA PAPVPDLTIR IAPPAGAEAS PVPAAPEGMP
AETPATSGDA AAMPGVPPTV APAAAPEAQP ATPPMEPTPT EQVPLPPATE PVRIDSLGLE
PVGGEPAPSV PVAPTPAQMQ ESQPVPPAVP PSLPHDAGGE VRAPVTPPEI PALPEPVAPP
AYPATPEVTA PATESTAPPL LTPTAPADGT DGGLVPYKSA RRTAPETLDG PIVPIPPAST
ALPGGTDVPT DGTTTYKAPL RRAPETLDAP ITVPPLPTPP APPAEPVTPP NPASTESGTA
AP