Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3114 |
Symbol | |
ID | 7175060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3927746 |
End bp | 3930994 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643541650 |
Product | hypothetical protein |
Protein accession | YP_002437518 |
Protein GI | 218888197 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02455] trehalose synthase, Pseudomonas stutzeri type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.000894612 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCGAACC GCGCCGCGCT CCGCACCATT GCCCTGATGC TCCGCAGCCT GCCCGCAATC CGTCCGCAAT CCGGCCTGCC GCGCGCCGCT GCCGCGCCCA GCCGTTCGGC CATCCAGCCC GCCGCCCCTG TTCCGGGCAT GGTACTGCAC CTGGTACTGA GTCTGGCCCT CGGCCTGCTC CTGACAGGGT GCGGGGCTCC TCCGGCCAAA CAGAAATCGT TGCTGTTGCC GCAAGGCCCC TCGGTCACCC GGGCGGACCC CGGCTACATG CAGTGGCTGG AAAAGCAGTC GCTGCTGGGG GCCGGGGCGG AACTTTCGCG CGTGGTCTCC GGCAGCCAGC TGGGCTGGCG CTCTCCTTCG CTGCCGCCCG ACCCGGACAA CCTGCTGCGC GCCGCCGATA CCTGGCTGCT GGTGCACCCC ATGGCGCTCA TCGCCGACGG CACGCCTTCG GCCTTCGCCA TCCTGGCCCA GCCCAGAACG CAGGAACTGC TGCGCCGCAC GGGCGCGCGC GGGCTGTACG TCGCCCCCTC CGGCGGCGCC GGGGCCATCT GGGCCTACGA CCGCAGCGCC ACCCTGACCG GCGACGACAC CATCCAGCAC GGCTTTTCCG AGGCGGCGGG CACGGACGAC GAATACCTGC GTCTGCGCCG CCTGACCGAC AACAACCGCA TGCTGCTGGG CACCGACATC ATCCCCGCCG CCACCGGCAT GGGACCGGAC TTCTTTCTGG CCGCGCGCAA CGTGCGCGAA TACCCCGGCG CTTACTGCCT GGTGGAAATC CCGCGCGACC TGTGGCCTTA CATGCCCGCC AGTTCGTCGG AATGGCAGGC CCGCCCGCTC ACCCGCGCCC AGCATGACCT GCTGGCGGAA AAGGGACTGC TGCCCGCCTC CCTCTCGCGC GACCTGCTGT CGTGGGCGCG GCCCGGCGGC TGGGCCGTCA CCGGAGAGGT TCGCGGGTCC GACGGCACCC TGCGCCGCTG GGTCTACCGC CATGCCGGGC GCTACGACAT GCCAGTGCTG CACTGGGACG ACCCTTCCGC CGCCGCACGG CGCATCCTGT CTTCCAGCAT CATCCAGCAG ATCGGCCTGC GCGGCATGGC CCTGACCGGC TTCCGGGTGG AACCCCTGAC AGGGCTGGAC CCGCTGCCCC GCACCGCCTA CGGCGACCAG GGCCATGCCC CGGCCCTGGA ACCGGCCCCC ACCGCCGCCC TGTCACTGGC CCGCGAAACG CGCCGCTACG GCGGCTGGGC CTGGCAGCGC GACAGGCTGC CCCTGCCGCT GCTGGCCCGC ACCCTGCACG AATCCGCCGA CGTGGCCGAA GACACCGTCA CCAGCCCTGC CGCCGAACAC GCCCTGCTCA CCGGCGATGC GCGCCCCCTG CGCGCCCTGC TGGACGACGC CCTGCGCCTT GGCATCGACA TGCGCCGCCT GGTGCATGCC ACCCCCGGCC CGGACGGCGT GGACTACGCC CTGCCGCAAC TGTCCCCCGG CATGCTGCCG CCCGGCGCGG CGGCGGGCGA TGCCGCCCTG GCGGACGACA TGCGCGCGGC CATGCGCACG CGCGCGGCCC TGTGGGCGTC CACCATGCCG CTGGGCGGGG CGGGCGACGT GCTGCCCGTC ACCGGCGCGG GGCTTGCCGC GCTGGGCGCT GGCTTCAGCC ATGCCGACGC CGCCAGGGCC GACGCGCGCG AAACGATCCG CCAGGGGCAT CTGGCCCTGG TCTTCTTCAA GGCCATGCAG CCGGGCCTGC TGGTGCTGCA CGGGCAGGAC CTGGCGGGCG CCCTGCCGCT GGACTGGCAC GTCATGGCCG ATTCCGAGGA CCGCTGGGAC CCGGCGCTGG CCCCGCGCGG CGCGTACGCC CTGTACCGCA CCGCCCGCAC CACCGTGCTG ACCAAGCAGG GCATGCCCCG CGCCCCGGTG GCCTACCCCA CACCCGACGA GCAACTGCAC GACCCGCATT CGTTCCTCAA CGGGGTGCAC GCCATTACCG CCATGCGCGA ACGCACCGGC ATTGCCGCCG GGCGCGTGGC CGCGCGCCTG CGCACGCAGG GACGCGGCTG CATCGCCCTT GCCGTGGAAC TGCCCGGTGG GCGCGGCGTG GTGGTGGCGG TCACCAACTT CGGGCGCGAG GCAGTGACCG AACGGCTGGA CATGGCCGCC ACGCCCAAGC TTCTGGAACT GTTCGGCGCG GGCAACCCCG CCGTGGACCT GGAGGAAGGC ACCCCGCTGC CGCTGGATGG TGGCCGCATG GTGCTGCATC TGAACCCGTG GGAAACCCGC GCCATCCTTG TGGGGCGCGA TGCCAAGTCC ATCGGCGCGG CAACGGCGGC GGAACAGCCC AAGGGGCCGT TCGTGCCCGC CCGCGACGCC ACGCCCATGC CCGTGGTCGC GCCACCCGCA CCGGCCAAGT CGGCGGTGGC GCCCCCGGCT CCGGCGCCCG TGCCGGACCT GACCATCCGC ATCGCACCGC CCGCCGGGGC CGAAGCCAGC CCCGTGCCCG CAGCCCCGGA AGGGATGCCC GCCGAAACTC CGGCCACCAG CGGCGACGCG GCGGCAATGC CCGGCGTGCC GCCCACCGTG GCCCCCGCCG CTGCTCCTGA AGCGCAACCT GCCACGCCGC CGATGGAACC GACCCCCACG GAGCAGGTGC CCCTGCCCCC GGCCACCGAG CCGGTCAGGA TTGACTCCCT TGGGCTTGAA CCCGTTGGAG GTGAACCGGC CCCATCGGTG CCGGTGGCCC CCACGCCCGC CCAGATGCAG GAATCGCAGC CCGTGCCGCC CGCCGTGCCG CCCAGCTTGC CTCATGACGC GGGCGGCGAG GTGCGCGCGC CGGTCACGCC CCCGGAAATC CCGGCACTGC CGGAACCCGT GGCGCCCCCC GCGTACCCCG CGACTCCGGA GGTAACGGCC CCGGCAACGG AATCCACCGC CCCGCCACTC CTGACGCCCA CGGCGCCCGC TGATGGCACT GACGGCGGCC TCGTTCCCTA CAAGTCGGCA CGACGCACCG CGCCGGAAAC ATTGGACGGC CCGATCGTTC CCATTCCCCC GGCGTCCACC GCCCTGCCCG GCGGGACCGA CGTCCCGACG GACGGCACGA CCACCTACAA GGCCCCCCTG CGCAGGGCCC CGGAAACGCT GGACGCCCCC ATCACGGTGC CGCCGCTGCC CACGCCTCCG GCACCGCCCG CCGAACCGGT GACACCACCG AACCCGGCGT CAACGGAATC GGGAACCGCC GCGCCCTAG
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Protein sequence | MPNRAALRTI ALMLRSLPAI RPQSGLPRAA AAPSRSAIQP AAPVPGMVLH LVLSLALGLL LTGCGAPPAK QKSLLLPQGP SVTRADPGYM QWLEKQSLLG AGAELSRVVS GSQLGWRSPS LPPDPDNLLR AADTWLLVHP MALIADGTPS AFAILAQPRT QELLRRTGAR GLYVAPSGGA GAIWAYDRSA TLTGDDTIQH GFSEAAGTDD EYLRLRRLTD NNRMLLGTDI IPAATGMGPD FFLAARNVRE YPGAYCLVEI PRDLWPYMPA SSSEWQARPL TRAQHDLLAE KGLLPASLSR DLLSWARPGG WAVTGEVRGS DGTLRRWVYR HAGRYDMPVL HWDDPSAAAR RILSSSIIQQ IGLRGMALTG FRVEPLTGLD PLPRTAYGDQ GHAPALEPAP TAALSLARET RRYGGWAWQR DRLPLPLLAR TLHESADVAE DTVTSPAAEH ALLTGDARPL RALLDDALRL GIDMRRLVHA TPGPDGVDYA LPQLSPGMLP PGAAAGDAAL ADDMRAAMRT RAALWASTMP LGGAGDVLPV TGAGLAALGA GFSHADAARA DARETIRQGH LALVFFKAMQ PGLLVLHGQD LAGALPLDWH VMADSEDRWD PALAPRGAYA LYRTARTTVL TKQGMPRAPV AYPTPDEQLH DPHSFLNGVH AITAMRERTG IAAGRVAARL RTQGRGCIAL AVELPGGRGV VVAVTNFGRE AVTERLDMAA TPKLLELFGA GNPAVDLEEG TPLPLDGGRM VLHLNPWETR AILVGRDAKS IGAATAAEQP KGPFVPARDA TPMPVVAPPA PAKSAVAPPA PAPVPDLTIR IAPPAGAEAS PVPAAPEGMP AETPATSGDA AAMPGVPPTV APAAAPEAQP ATPPMEPTPT EQVPLPPATE PVRIDSLGLE PVGGEPAPSV PVAPTPAQMQ ESQPVPPAVP PSLPHDAGGE VRAPVTPPEI PALPEPVAPP AYPATPEVTA PATESTAPPL LTPTAPADGT DGGLVPYKSA RRTAPETLDG PIVPIPPAST ALPGGTDVPT DGTTTYKAPL RRAPETLDAP ITVPPLPTPP APPAEPVTPP NPASTESGTA AP
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