| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3106 |
|---|
| Symbol | |
|---|
| ID | 7175052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3917366 |
|---|
| End bp | 3918346 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643541643 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002437511 |
|---|
| Protein GI | 218888190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 0.0076557 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTGGA CGTTTCCCGC CCTGTTGGCG GCTGTGCTGG CCGCGCTGGA CGCCACCCTG
CTGCGCCGCC TTGCCGGTGA CCTGCCCCCG GCCCGCATGG TGGCCTATCC GGTATTCTGG
AGCCTGCCGC CGTTTCTGGC GCTGCTGGCC GCACGCGGCG TGTCCGACCT GCCCGCGCCG
TTCTGGCTGG CCACCCTTGC CGCCGTGCCG GTGAACATGG CCGGGCACCT GCTCACGGCG
TGGGCGGTGC GCCTGGCGCC CGTGTCGCGC ACGGTGCCCT ACCTGTGCTT TTCGCCTGTT
TTCGTGGTGG TGCACGAATA TCTGCTGCTG GGGGTTGCGC CGCGCCCGGC GGGCGTGGCC
GGGGTACTGC TGGTGGTGGC GGGCAGCTGG GTGCTGAACG CGGGCGGGGC GGAAACCCAT
GATCCGGGGC ATGACGAAGA TGGCGGCAGC GGCATCATGA CCCGGCTGCT GCGCCCCTTC
CGTACCCTGA TGGCAGAGCC CGGCGCGCGG ATCATGCTGG GGGTGGCCCT GCTGTGGGGG
CTGGGCAGCG TGCTGAATCG CAAGATGGTG CTGTACGCCA CGCCTGCCGT GGCGGGCGGG
GTGTTCTTCG CCATCTACGG CCCGGCCATG CTGGCGGCGC TGATGCTGTT CGGCGGGGTG
CGCCCGCGCA TGCTCGTGGA CAGGCCGTTG CGGGGCGCGG CCATGGGCGC GGTGCTGTTT
CTGGCCGCGT ACGCGCACTT TACGGCCATG AGCCTGACCA CGGCCGCCAA CATGATCGCG
GTGAAGCGGC TGGACGGGGT GTTTGCCGTG CTCATCGACC GGCTGTCCGA ATGGTTGGCC
GGTCGCGCCG AAGGACCACG CAGCGTCCGC CGGGCTGGCC TGCCTGCTGC GGGCGCAGGG
TGGCGACCTG TCCGCGACGG CAGATTGCCC GGTGCGGCGC TGATGGCCGC AGGAGCCGCC
CTGGTGGTGC TGGCGTCCTG A
|
|---|
| Protein sequence | MSWTFPALLA AVLAALDATL LRRLAGDLPP ARMVAYPVFW SLPPFLALLA ARGVSDLPAP
FWLATLAAVP VNMAGHLLTA WAVRLAPVSR TVPYLCFSPV FVVVHEYLLL GVAPRPAGVA
GVLLVVAGSW VLNAGGAETH DPGHDEDGGS GIMTRLLRPF RTLMAEPGAR IMLGVALLWG
LGSVLNRKMV LYATPAVAGG VFFAIYGPAM LAALMLFGGV RPRMLVDRPL RGAAMGAVLF
LAAYAHFTAM SLTTAANMIA VKRLDGVFAV LIDRLSEWLA GRAEGPRSVR RAGLPAAGAG
WRPVRDGRLP GAALMAAGAA LVVLAS
|
|---|
| |