| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3100 |
|---|
| Symbol | |
|---|
| ID | 7175046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3912747 |
|---|
| End bp | 3913490 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643541637 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_002437505 |
|---|
| Protein GI | 218888184 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.012371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC TCACTTCCAC CGCGCTGGTC ACCGGGGGCT CCCGGGGCAT CGGCAAGGCC
GTGGCGGAAA CCCTGGCCCG CGAGGGCTTT CAGGTCTACC TTACCTACGT GAGCAAGCCC
GAGGAAGCCG AAGCCGTGGC CGCGGGCATC AACGCCGCGG GCGGTTCGGC GCGGGCCTTC
CGGCTGGACG TTTCCGACGC CGCCGCCGTG GCCGCGTTCT TTCAGGAAGA AATCCGGGAA
AAGGTCACCC TGGACGTGCT CGTGAACAAC GCGGGCATCA CCAAGGACGG GCTTATCCTG
CGCATGAAGG ACGACGACTT CGACCGCGTG CTGGATGTCA ACCTTTCCGG CGCGTTCACC
TGCCTGCGCG AGGCCGCCAA GCTGATGACC AGACAGCGCA AGGGCCGCAT CGTCAACATC
ACCTCGGTGG TGGGGCAGAT GGGCAATGCC GGGCAAGTCA ACTATTCCGC CGCCAAGGCG
GGCCTGATCG GCATGACCAA GTCTGCCGCC AAGGAACTTG CCGGACGCAA CGTCACGGTC
AACGCCGTGG CACCCGGCTT CATCGAAACG GACATGACCG CGAAGCTCAC CGACGAGGTT
CGCGCGGCAT ATATCGAAGC CATCCCGCTC CGGCGCCTGG GCCAGCCCCA GGACATCGCC
GATGCCGTGG CCTTTCTGGC TTCCGATAAG GCGGGCTACA TCACCGGGCA GGTCATCGCC
GTCAACGGCG GCATGTACTG CTAG
|
|---|
| Protein sequence | MSELTSTALV TGGSRGIGKA VAETLAREGF QVYLTYVSKP EEAEAVAAGI NAAGGSARAF
RLDVSDAAAV AAFFQEEIRE KVTLDVLVNN AGITKDGLIL RMKDDDFDRV LDVNLSGAFT
CLREAAKLMT RQRKGRIVNI TSVVGQMGNA GQVNYSAAKA GLIGMTKSAA KELAGRNVTV
NAVAPGFIET DMTAKLTDEV RAAYIEAIPL RRLGQPQDIA DAVAFLASDK AGYITGQVIA
VNGGMYC
|
|---|
| |