Gene DvMF_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3100 
Symbol 
ID7175046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3912747 
End bp3913490 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID643541637 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002437505 
Protein GI218888184 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.012371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TCACTTCCAC CGCGCTGGTC ACCGGGGGCT CCCGGGGCAT CGGCAAGGCC 
GTGGCGGAAA CCCTGGCCCG CGAGGGCTTT CAGGTCTACC TTACCTACGT GAGCAAGCCC
GAGGAAGCCG AAGCCGTGGC CGCGGGCATC AACGCCGCGG GCGGTTCGGC GCGGGCCTTC
CGGCTGGACG TTTCCGACGC CGCCGCCGTG GCCGCGTTCT TTCAGGAAGA AATCCGGGAA
AAGGTCACCC TGGACGTGCT CGTGAACAAC GCGGGCATCA CCAAGGACGG GCTTATCCTG
CGCATGAAGG ACGACGACTT CGACCGCGTG CTGGATGTCA ACCTTTCCGG CGCGTTCACC
TGCCTGCGCG AGGCCGCCAA GCTGATGACC AGACAGCGCA AGGGCCGCAT CGTCAACATC
ACCTCGGTGG TGGGGCAGAT GGGCAATGCC GGGCAAGTCA ACTATTCCGC CGCCAAGGCG
GGCCTGATCG GCATGACCAA GTCTGCCGCC AAGGAACTTG CCGGACGCAA CGTCACGGTC
AACGCCGTGG CACCCGGCTT CATCGAAACG GACATGACCG CGAAGCTCAC CGACGAGGTT
CGCGCGGCAT ATATCGAAGC CATCCCGCTC CGGCGCCTGG GCCAGCCCCA GGACATCGCC
GATGCCGTGG CCTTTCTGGC TTCCGATAAG GCGGGCTACA TCACCGGGCA GGTCATCGCC
GTCAACGGCG GCATGTACTG CTAG
 
Protein sequence
MSELTSTALV TGGSRGIGKA VAETLAREGF QVYLTYVSKP EEAEAVAAGI NAAGGSARAF 
RLDVSDAAAV AAFFQEEIRE KVTLDVLVNN AGITKDGLIL RMKDDDFDRV LDVNLSGAFT
CLREAAKLMT RQRKGRIVNI TSVVGQMGNA GQVNYSAAKA GLIGMTKSAA KELAGRNVTV
NAVAPGFIET DMTAKLTDEV RAAYIEAIPL RRLGQPQDIA DAVAFLASDK AGYITGQVIA
VNGGMYC