| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3064 |
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| Symbol | groEL |
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| ID | 7175010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3869074 |
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| End bp | 3870720 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643541601 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_002437469 |
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| Protein GI | 218888148 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.442194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCA AGGAAATCCT GTTCGACGTC AAGGCCCGCG AAAAGCTTTC CCGCGGCGTG
GACAAGCTCG CCAATGCCGT CAAGGTGACC CTCGGTCCCA AGGGACGCAA CGTGGTCATC
GAAAAGTCTT TCGGCTCGCC CGTCATCACC AAGGACGGCG TGACCGTGGC CAAGGAAATC
GAACTCGAGG ACAAGTTCGA GAACATGGGC GCGCAGATGG TCAAGGAAGT TGCTTCCAAG
ACCAGCGACA TCGCCGGTGA CGGCACCACC ACCGCCACCA TCCTGGCCCA GGCCATCTAC
CGCGAAGGCG TGAAGCTGGT GGCCGCCGGC CGCAGCCCCA TGGCCATCAA GCGCGGCATC
GACAAGGCCG TCGAAAAGCT GGTCAAGGAA CTTGGCACCC TGGCCAAGCC CACCCGCGAC
CAGAAGGAAA TCGCCCAGAT CGGCACCATT TCCGCCAACT CCGACACCAC CATCGGCAAC
ATCATCGCCG AGGCCATGGC CAAGGTGGGC AAGGAAGGCG TCATCACCGT CGAGGAAGCC
AAGGGTCTGG AAACCACCCT TGAAGTGGTC GAAGGCATGC AGTTCGACCG CGGCTACCTG
TCGCCCTACT TCGTGACCGA TCCCGAAAAG ATGATCTGCG AACTCGACGA GCCCTTCATT
CTCTGCAACG AGAAGAAGAT CTCCAGCATG AAGGACATGC TGCCCGTTCT CGAACAGGTG
GCCAAGATGA ACCGTCCGCT GGTGATCATC GCCGAAGACG TGGAAGGCGA AGCCCTGGCC
ACCCTGGTGG TCAACAAGCT GCGCGGCACC CTTCAGGTTG TGGCCGTGAA GGCCCCCGGC
TTCGGCGACC GCCGCAAGGC CATGCTGCAG GACATCGCCG TCCTGACCGG CGGCACCGTG
GTGTCCGAAG ACATGGGCGT GAAGCTCGAA AACATCTCGG TGGCCGACCT TGGCACCGCC
AAGCGCGTGG TTGTGGACAA GGAAAACACC ACCATCGTTG ACGGCGCCGG CAAGTCCGAA
GACATCAAGG CGCGCGTGAA ACAGATCCGC GCCCAGATCG ACGAAACCAC CTCCGACTAC
GACCGCGAAA AGCTGCAGGA ACGCCTGGCC AAGCTGGTGG GCGGCGTGGC CGTGATCAAC
GTGGGCGCCG CGACCGAAAC CGAAATGAAG GAAAAGAAGG ACCGCGTCGA GGACGCCCTG
AACGCCACCC GCGCTGCGGT GGAAGAAGGC ATCGTCCCCG GTGGCGGCAC TGCCTACATC
CGCATCTCCA GGGTGCTGGA CGACGTGAAG CCCGCTGACG ACGACGAAGC CGCTGGCGTG
AACATCATCC GCCGCGCCAT CGAAGAACCG CTGCGCCAGA TCTCGTCCAA CGCCGGCTAC
GAAGGTTCCA TCGTGGTCGA GAAGGTGCGC GACGGCAAGG ACGGCTTCGG CTTCAACGCC
GCGTCCGGCG AGTTCGAAGA CCTGATCAAG GCCGGTGTCA TCGACCCCAA GAAGGTCACC
CGCATCGCCC TGCAGAACGC GGCCTCCGTT GCCTCGCTGC TGCTGACCAC CGAATGCGCC
ATTGCCGAAA AGCCCGAAGC CAAGAAGGAC ATGCCCATGC CCGGTGGCGG CATGGGCGGC
ATGGGCGGCA TGGGCGGCAT GTACTAG
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| Protein sequence | MASKEILFDV KAREKLSRGV DKLANAVKVT LGPKGRNVVI EKSFGSPVIT KDGVTVAKEI
ELEDKFENMG AQMVKEVASK TSDIAGDGTT TATILAQAIY REGVKLVAAG RSPMAIKRGI
DKAVEKLVKE LGTLAKPTRD QKEIAQIGTI SANSDTTIGN IIAEAMAKVG KEGVITVEEA
KGLETTLEVV EGMQFDRGYL SPYFVTDPEK MICELDEPFI LCNEKKISSM KDMLPVLEQV
AKMNRPLVII AEDVEGEALA TLVVNKLRGT LQVVAVKAPG FGDRRKAMLQ DIAVLTGGTV
VSEDMGVKLE NISVADLGTA KRVVVDKENT TIVDGAGKSE DIKARVKQIR AQIDETTSDY
DREKLQERLA KLVGGVAVIN VGAATETEMK EKKDRVEDAL NATRAAVEEG IVPGGGTAYI
RISRVLDDVK PADDDEAAGV NIIRRAIEEP LRQISSNAGY EGSIVVEKVR DGKDGFGFNA
ASGEFEDLIK AGVIDPKKVT RIALQNAASV ASLLLTTECA IAEKPEAKKD MPMPGGGMGG
MGGMGGMY
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