Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3057 |
Symbol | |
ID | 7175003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3858618 |
End bp | 3860351 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643541594 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002437462 |
Protein GI | 218888141 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.186187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTCG CCGAACTGCC CCTTGACGCC CGCCTGCTGG CCGGGGTGGA AAGCATGGGC TACCATCTGC CCACCCCCGT GCAGCGCCGG GCCATTCCCG CCGCGCTGTC CGGGCGCGAC GTGCTGGCCC TGGCCGCCAC CGGCACCGGC AAGACCGCCG CCTACGCGTT GCCGTTGCTG CAACGCCTGC TGGAAGGGCC GCGCGGGCAG GTGCGGGCGC TGGTGGTGGC CCCCACGCGC GAACTGGCCG AGCAGATCCA CGACCACATC CGACGGCTGG GCTCCATGAC CCGCCTGCGC TCCACCACCA TCTACGGCGG GGTGGGCATC ATGCCGCAGG CCCTGCGGCT GCGCACCGGG GTGGAGATCG TGGTGGCCTG TCCCGGGCGG CTGCTGGACC ACCTGCGACG CGGCAACCTG GACCTTTCCG CCCTTGACGT GCTGGTGCTG GACGAGGGCG ATTCGCTGTT CGAACTGGGC TTTCTGGCCG ACGTGCGGGC GTTGCTGGCC GCCGTGCCCG CGCGGTGTCA GCGCATGCTG TTTTCCGCCA CCTTGCCGCA GGCCGTGCAA GGCCTGGCGG GCGAGGCCCT GCGCGACCCC GTGACCGTCA GCGTGGACGC GCAGGCCCCG GCGGCCACCG TGGACCATGC CCTGTATCCG GTGCCCGCCC ACCTCAAGAC CCCGCTGCTG AAGGCCATGC TGCGCGCCCG GCTGCTGCCC GGCGTGGCTG CGCACGCCGG GACGGCCCAT GCTCCCGGCA TGCCCGGCAT GCCCGGCATG CCCGATATGC CCGATATGCC CGCCATGCCT GACATGCCTG ACATGCCTGA CATGCCTGAC ATGCCGGATG ACATCGGCGG CGGCATTGAT GACGAGGGTG GCGACGGCTT CGATGCCGAC GACGCTGGCG CTTTCGCCGG GGATGCGGGC GGAGGCTATC CGCCCCTGCA CTTCGGCGAG GACGAACCCT TGGCCGGTGC GGTGCTGGTG TTCGTGCGCA CCCGGCACGG GGCGCGCCGC CTGTGGCAGC AGCTGGCGTC CACCGGGCTG CGCGTGGGGT GCCTGCAAGG CAAGCTTTCG CAGCGGCGGC GTCAGGCGAC CCTGGACGGG TTTCGCACCG GGCGCTACGC CGTGCTGGTG GCCACCGACG TGGCCGCGCG CGGGCTGGAC ATTTCGCGGG TGACCCACGT GGTGAATTAC GACGTGCCCG CCACGGCGGA CGCCTACATC CACCGCATCG GTCGCACCGG TCGCGCCGCC CGCGCGGGCA CGGCCATGAC CCTGGTGGCT CCCGGCGACG AGACGGCGGT ACGCCACATA GAGCGCGCCC TGGGCGGCCC GGTGACCCGC TGCCGCTTCG AGGGCTTCGA CTACGGCGCG GCGGCACGCA GCCCGGAAGG GGCGCGCCCC GCCCTGCCGC CCCGGCAGGC CCGCCTGCCC GGCGGGCGCA AGCCGCAGTT GCAACCCGCC GAGGCCCCGG AACCGCCGCG TCAGCCCGCC CGGCCCCGCC CGGCCCGCCA TGCCGTGCCC CCGGCGGCCC AGGGCGGCGC GCCGCAGCCG CAGGGTCAGC AGGCGGCCAA GTCCGCCAGG CCGCAGTCCG GCCCCGGCAC TTCCGGGCAT GCGGGGCAGG ATGCGCGCGC CAAGGGCGGT CGGGACGGCA TGGGGCGCGA GGGCGGGGGG CGTGGCCCTT CCGGTGGCTC CGCTGGCGGC TCCGGTTCCC ACTCCGCAGG CTGA
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Protein sequence | MTFAELPLDA RLLAGVESMG YHLPTPVQRR AIPAALSGRD VLALAATGTG KTAAYALPLL QRLLEGPRGQ VRALVVAPTR ELAEQIHDHI RRLGSMTRLR STTIYGGVGI MPQALRLRTG VEIVVACPGR LLDHLRRGNL DLSALDVLVL DEGDSLFELG FLADVRALLA AVPARCQRML FSATLPQAVQ GLAGEALRDP VTVSVDAQAP AATVDHALYP VPAHLKTPLL KAMLRARLLP GVAAHAGTAH APGMPGMPGM PDMPDMPAMP DMPDMPDMPD MPDDIGGGID DEGGDGFDAD DAGAFAGDAG GGYPPLHFGE DEPLAGAVLV FVRTRHGARR LWQQLASTGL RVGCLQGKLS QRRRQATLDG FRTGRYAVLV ATDVAARGLD ISRVTHVVNY DVPATADAYI HRIGRTGRAA RAGTAMTLVA PGDETAVRHI ERALGGPVTR CRFEGFDYGA AARSPEGARP ALPPRQARLP GGRKPQLQPA EAPEPPRQPA RPRPARHAVP PAAQGGAPQP QGQQAAKSAR PQSGPGTSGH AGQDARAKGG RDGMGREGGG RGPSGGSAGG SGSHSAG
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