Gene DvMF_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3056 
Symbol 
ID7175002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3857273 
End bp3858325 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content73% 
IMG OID643541593 
Productaminoglycoside phosphotransferase 
Protein accessionYP_002437461 
Protein GI218888140 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.17542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC TGCTGTACCG TTTCGGCATC ACCCCGCGCC GCCTGGCCAC GGAATTCCCC 
CTGCCCGGCA GCCCGGAACG CTGCCTGACC CGCACGGCGG TACAGGGCGA CGACGGACGG
CTGTGGATGC TGGAACGGTT GGCCCCGACG CAGGTTCCCC GGCGCGAGGC CATGGGCGAC
CTGCTGGCGC AACTGGCGGA CCCTGCCGTG TCCGGCCCGG AACTGGCCGC GCTGGTGCCC
GCGTACCTGC CGGTGGAGGA TGGCGACCTG CGCCATGTGC TCAAGGCGGA CACCCCGCCC
CATGCCGGGT ACTGGCAGCT TTCGCCCTTC GTGCCCGGCG CGGAACCGCC CCGCCCGGAC
TATCTGGACC ACGACTGGCG CGGATGCGCA GTGGCCGCCC TGCTGCTGGC CCTGCACCGG
GCCGGTGACA ACCTGCCCGC CGGACTGCCC CCCGCGCCGG TGCCCCCGCT GCCCGCGTTC
ATCGCCGGGC TGCACGAGGC GGTTGCGCGC CGTCTGCCGG AGGCCGCCCG CCGCCTGCAC
CCGGTACGCG ACGCGCTGGA GGCCCTGCCC GACGTGCTGG CCGCCCAGCC GGTGGTACTG
ACCCATGGCG ATGCCCACCC CCTGAACCTG ATCTGGACGC CCTGCGGAGA TGGCGGCGAT
ACTCCGGCGG GTGGCAGCGG ACTACCGGCC TCCCAACCGC TGGCCGCGCT GCGGGGGGTC
ATCGACTGGG AATTCGCCGG GGCGCAGCCC GCGCTGTACG ACGCCGCCAA CTGCATCGGC
TGCGTGGGCT TCGAGCACCC CTCTGGCCTT GGACGCGGCT TTGCCGCCGG ATTCACCACC
GCGCTGCGCC AGGGCGTGGC CCCGTACGAC CTTGCCGGAA TGGGGGCCGA TACGCTGCGC
CATCTGCCGC TGATGGTGCT GGCATCCCGC TTCGGCTGGC TGTCGGAATG GCTGCGCAGG
GGCGACCGGG ACATGCTGGA CATGGAACTG GACTACTGCG ACATCCTGCT GCACCACCGC
CAGCGGCTGG CGGACATGTG GGCCGGGGGG TAG
 
Protein sequence
MLDLLYRFGI TPRRLATEFP LPGSPERCLT RTAVQGDDGR LWMLERLAPT QVPRREAMGD 
LLAQLADPAV SGPELAALVP AYLPVEDGDL RHVLKADTPP HAGYWQLSPF VPGAEPPRPD
YLDHDWRGCA VAALLLALHR AGDNLPAGLP PAPVPPLPAF IAGLHEAVAR RLPEAARRLH
PVRDALEALP DVLAAQPVVL THGDAHPLNL IWTPCGDGGD TPAGGSGLPA SQPLAALRGV
IDWEFAGAQP ALYDAANCIG CVGFEHPSGL GRGFAAGFTT ALRQGVAPYD LAGMGADTLR
HLPLMVLASR FGWLSEWLRR GDRDMLDMEL DYCDILLHHR QRLADMWAGG