| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3051 |
|---|
| Symbol | |
|---|
| ID | 7174997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3851950 |
|---|
| End bp | 3853206 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643541588 |
|---|
| Product | protein of unknown function DUF88 |
|---|
| Protein accession | YP_002437456 |
|---|
| Protein GI | 218888135 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.10856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGAT TTTCCGGCTT CGACGAAGTA TATGCCGCGC TGTATGTGGA TTTCGACAAC
ATCTATTCGC GCCTGCGCGA ACAGGATGAA GACATTGCCC GCGCCTTTGC CACCAACCCC
CAGCGCTGGG TGAAGTGGAT AGAAGGGCAT GCCCTGCGCA TGTTGTACGG CGACGGGGTG
CGCCGCCGCA TCCTGAAACG CATTTGCTAC ATGAACCCGC AGTGCTTTCA CGAGTTCCGT
CCATTCTTCA TCCGTGCCGC CTTTCAGGTG GTGGACTGCC CGCCCCTGAC CAATCAGGGC
AAGACCAGCG CCGACATTCA TCTTGTCATG GACTGCATGG ACGCGCTGAA CCATTCCACC
CGCTTCGACG AATTCATCAT CCTTTCCGGT GACGCGGACT TCACGCCGCT GCTCATCCGC
TTGCAGGAAC ACGCCCGCCG CCCGCTGGTG CTGTCCGTGG GCTATACCTC GCCCGCGTAC
ACCGCCGCCG CCTCGTGGCG CATCCGCGAA GACTGGTTCG TGCAGCAGGC CCTGGAAGAC
GAACGTCCGG CGGAACCCGT CCCCGCGCCC ACCCCGTACC CCGCGCGCGG CAACGGCGAG
CGGTTGGCCC GCGTGGCCGA GGTGGTGCGC CGCACCGTGG CCGATGCCCC CGCCCCCGTG
GGCGTGGCCT CGCTGGCCCA GATCCTTCAG CGAGAGGTGG ATCCCGGCGC GGACTGGTTC
GGCTATGGTC GCCTGCGCGA CCTGCTGGAC GTGCTGGACC TGAAGGGGCT GGAATTTTCG
CCGGTGCCGC CCGGCTACCT GTACGACCCG GAACGCCATG AACAGCCCGA GGAACGCGAC
GCCCACGACG ACTTCCGCTC GCGCTACCCC GACCTGTACG ACTTTGCCCT GAAGGTGCAC
CGCCTGACCG ACATGCCCCT GCTGCGCCCC GACCACTTCC GGCAACTGCT GGGCATCATC
GTGGAAGAGG TCAACGCCAA CGGGTTCTTC ATGACCACCA CCTCGCGCAA CGTGCGCGAC
CGGTGCGTGG AGGCGGGCCT GCCCATTGCG CGGGGCCACG TGAACTTCGT GCTGGTGGGC
ATTGCGCGCG GGGGCTACCC CCTCAACGAG CAGGACGGCG TGAACCTGCG CGAGGTGGGC
AAGGCCTTTC TGCGCAACGC CTACGACCTG TGCCGCATGT CGCAGATCGA CCTGACCAAG
GCGGAACAGC AGATGTTGCT GGTGTGGATA CTGCCCAAGG AATCCATGGG CGATTAG
|
|---|
| Protein sequence | MGRFSGFDEV YAALYVDFDN IYSRLREQDE DIARAFATNP QRWVKWIEGH ALRMLYGDGV
RRRILKRICY MNPQCFHEFR PFFIRAAFQV VDCPPLTNQG KTSADIHLVM DCMDALNHST
RFDEFIILSG DADFTPLLIR LQEHARRPLV LSVGYTSPAY TAAASWRIRE DWFVQQALED
ERPAEPVPAP TPYPARGNGE RLARVAEVVR RTVADAPAPV GVASLAQILQ REVDPGADWF
GYGRLRDLLD VLDLKGLEFS PVPPGYLYDP ERHEQPEERD AHDDFRSRYP DLYDFALKVH
RLTDMPLLRP DHFRQLLGII VEEVNANGFF MTTTSRNVRD RCVEAGLPIA RGHVNFVLVG
IARGGYPLNE QDGVNLREVG KAFLRNAYDL CRMSQIDLTK AEQQMLLVWI LPKESMGD
|
|---|
| |