Gene DvMF_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3038 
Symbol 
ID7174983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3835379 
End bp3836008 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID643541574 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002437443 
Protein GI218888122 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.051717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG ACGCACGCAG AGCCATTCTG GACGCCGGGG CCGAACTGGT CCACCGCAAG 
GGATTCAACA ACACCGGCAT CAAGGAAATC CTCGACCTGG CACAAGTACC CAAAGGATCG 
TTCTACTTCT ACTTTCCCAG CAAGGAAGAA TTCGGGCTGG CGCTCATCGA CCATTACCGC 
GAGGTGCGCA CTCCGGCCCT GGTCCAGGTG CTGCGCGATG CCGAAACGCC CCCGCTGGAC 
CGGTTGCGCC GGTTCTTCGA ACTGGCCCGC CAGCGCTACC AGGAATGGGG CTTCGAACGC 
GGCTGCCCCT TCGGCAACCT GGCCCAGGAA ATGTGCGATC TTTCCCCGGC CATCTGCGAA 
AAGCTGCGCG AGGTGCTGGG CGGCCTGTCG AGGGCCATGG GCGACATCCT GCACGAGGCC 
GCCGCGCGCG GCGAACTGGC CCCCGGCCTG GAGCCCTACG AGACCGCCGC CTTCATCATG 
GACGCCTGGG AAGGGGCCGT CATGCGCATG AAGGCTGAAA AGAACGTCCA GCCCCTGCTG 
CGGCTGGAAC ACATGGTTTT TGCCCGCCTT CTGACCGATA CCCGGAGCGC CGCCCCCAGT 
CAGCCCGATC AGCCCAGTCA GCCCGATTAG
 
Protein sequence
MKRDARRAIL DAGAELVHRK GFNNTGIKEI LDLAQVPKGS FYFYFPSKEE FGLALIDHYR 
EVRTPALVQV LRDAETPPLD RLRRFFELAR QRYQEWGFER GCPFGNLAQE MCDLSPAICE 
KLREVLGGLS RAMGDILHEA AARGELAPGL EPYETAAFIM DAWEGAVMRM KAEKNVQPLL 
RLEHMVFARL LTDTRSAAPS QPDQPSQPD