| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3023 |
|---|
| Symbol | |
|---|
| ID | 7174967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3816895 |
|---|
| End bp | 3818472 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643541558 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_002437428 |
|---|
| Protein GI | 218888107 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAACA GAAAGTGTAT CGAGATTGTC ATCATTCTTT TGTGCGTAGT GTTCGCTGCG
TGTGTTTCTC ATGCCGAGGA TGCTCACGTT TCCGATCCGA GTGGTGCGTC CATAGGCACT
GCTGCTGACG TCATCGGCGC GACGGCGGGG GCGCCCACCA AGGAAGAATT CGACGCGTTG
TCCCAGAGTG AGCCGTTGGC GGCCAAGGTT GCCGATGTGG TGGGGCACAA CCGTATCGCC
ATCAACATGG TGTGGACGTT GTTGTGCGGC TTCCTGGTCA TGTTCATGCA GGCGGGCTTT
GCCCTGGCGG AAACGGGGTT TACCCGCGCC AAGAACGCCG GGCACACCAT GGCCATGAAC
ATGATGATCT ACGGCATCGG CATGCTGGGG TATTGGATAT GCGGCTTTGC CCTGCAAATG
GGCGGGGTGG GCGGCGTGCT CAGTCTGGGC GGTGCCGGGG CGCTGGCCAA CGAATTTACC
GTGACCATTG CTGGCAAGGA ATTCGGCCTG TTCGGCACAA CCGGGTTCTT CCTGTCCGGC
GATGCCTATG ACGCGGTGAT CTTTTCCGTC TTCCTGTTCC AGATGGTGTT CATGGACACC
ACCGCCACCA TTCCCACAGG TTCCATGGCG GAACGCTGGA CCTTCAAGTC GTTCGTCGTC
TACGGCTTCT TCATTTCCAT GTTCGTGTAC CCGCTGTTCG CCAACTGGGT GTGGGGCGGC
GGCTGGCTCT CCGCCCTTGG CCGCAACTTC GGCCTTGGCC ACGGCATGGC GGACTTTGCC
GGCTCCGCCG TGGTGCACAT GACCGGCGGG GTGGCTGCGG CTGCCGGGGC CATCGTGCTG
GGGCCGCGCC TTGGCAAGTT CAAGCCGGAT GGCACCCCTG TGGCCATGCC CGGTCACCAC
ATTCCCATGG CCATTGCCGG GTGCTTCATC CTGGCCTTCG GCTGGTTCGG GTTCAATGCC
GGGTCTACCC TGGCTGGCGG CGACCTGCGC ATCGGAGTCA TTGCCACCAA CACCATGCTG
GCTTCCGCCT CTGGCGCGTT CTTTTCAATG ATGTACATGT GGATGCGTTA CGGCAAGCCC
GACGTGTCCA TGGCCGCCAA CGGTCTGCTG GCGGGCCTGG TGGCCATCAC CTCGCCGTGT
GCCTTCGTCA ACTCGGTGGC TGCGGTGGGC ATTGGCGCCG TGGCCGGGAT ACTGCTGTGC
GTCAGCGTGC TGTTCGTGGA GCAGACCCTG AAGATCGACG ATCCGGTGGG CGCCATTTCG
GTGCACGGCG TCAACGGCGC ATGGGGCGTG CTGTCCCTGG GCCTGTTTGC CGACGGCACC
TACGGCGAAG GGTTGAACGG CGTGGAAGGC GCCGTGAAGG GTCTGTTCTA CGGGGATGTC
TCGCAGTTCA TGGCCCAGCT GGCCGGCGTG ATCACCAACA TCGTGTTCGT GTTTGTGGTG
ATGTACGTGT TCTTCAAGTT GCTGGACAAG GTCGTGCCGT TGCGCGTCGA TCCGGAACTG
GAGCTGGAAG GGCTGGACCA AGCCGAGGTG GCGGTTTCCG CCTACCCCGA CTTCAACCTG
AAAAAGGCCA TGAAGTAG
|
|---|
| Protein sequence | MRNRKCIEIV IILLCVVFAA CVSHAEDAHV SDPSGASIGT AADVIGATAG APTKEEFDAL
SQSEPLAAKV ADVVGHNRIA INMVWTLLCG FLVMFMQAGF ALAETGFTRA KNAGHTMAMN
MMIYGIGMLG YWICGFALQM GGVGGVLSLG GAGALANEFT VTIAGKEFGL FGTTGFFLSG
DAYDAVIFSV FLFQMVFMDT TATIPTGSMA ERWTFKSFVV YGFFISMFVY PLFANWVWGG
GWLSALGRNF GLGHGMADFA GSAVVHMTGG VAAAAGAIVL GPRLGKFKPD GTPVAMPGHH
IPMAIAGCFI LAFGWFGFNA GSTLAGGDLR IGVIATNTML ASASGAFFSM MYMWMRYGKP
DVSMAANGLL AGLVAITSPC AFVNSVAAVG IGAVAGILLC VSVLFVEQTL KIDDPVGAIS
VHGVNGAWGV LSLGLFADGT YGEGLNGVEG AVKGLFYGDV SQFMAQLAGV ITNIVFVFVV
MYVFFKLLDK VVPLRVDPEL ELEGLDQAEV AVSAYPDFNL KKAMK
|
|---|
| |