Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3012 |
Symbol | |
ID | 7174956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3800563 |
End bp | 3802239 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643541547 |
Product | hypothetical protein |
Protein accession | YP_002437417 |
Protein GI | 218888096 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 99 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTATTT CGACCACGCG GCCCAATAGC CCGCCGCAGG GAGACGGCAC GGCGGCGCCA TCCGGCCCAC CCCGCGTGCC CCACGGCCCC GGCGCTCCCC GCATCCCGCT GTGGGCGGCG GCGCTGTTCG TTGCCGCCCT GCTGTGCGCC GGGCTGCTGC TGGAGCGTTC GTCCTTCGTC CGGCAGTACC GCGCCGTGTC GCTGCACATT GCCACCGGCA AGGACTCGCT GGGTTCCCCT CGCAAGCGTC AGTTGCTGGC CGAGCTGGGC CTGCCCGACG TGCACACGGT AGCTCCCGAA CACCGCGACC ATGTCGAAAG GCTGCTCGGC GAGGCGCGCG CCGACATATC CCCAGCCCTC ATCGCCAGCG GCTGGCCCGT GGTGGCCATC CGTACGGACG AGGAGAACCT TTCGGACCCG GAAATCGGCA TCGTCGCCAA TCCGGAGGAG CGCGGCATCG CCTGGGAACA CCTGTCTTCC ATGGTGTACT ACAGGGACGG AGAAGAACGG CTCGCCACGG GCGCGGGGCT GCGCATCCAC GGCGGCGGCT CGCGCAAGGA CGGCATATCC TTCCGCCTGT ACTTCCGGAA CTCGTACGGC CAATCCCCCA TCCCCGCAGA CATGTTCTTT CCCGGTGCCG AAGGCAGCCT GAAACGCATC GTCCTGCGCA AGGAAAAGAC ACCCCGTCCC GGCTTCGTCT GCATGCTGGG CTTCGATGTC ATGGCCAGGC TCGGGGCGCA GGTTCCGCAC TTCGTGCCCG CCATTTACCT GGTCAACGGC AAGGAAATGG GGATTTCGCT GCTGTGCGAG CACATCAGCG TCAAGGGGTG GCACCGCAAG CTCGGGCACG GCAACTTTCT GCTCTACAAC ATCCGCAAGA GCAACGAACG CAAGGAGTTC GCAGCATTAC GCGAGCTGTA CCTATGGGCC CGGCTGATGC CCGCACCGCT CACCATGCGG CAGGTGGAAC GTCGGATGGA CCTGCGCAGC ATGTGTGCGA TCATCTTCGG TTCGGTGTAC CTGGGAGCCA ACGACTGGGA CCAGGGAGCC TTCCTGCTCG ACAAGACCCA GCCCGACCCG CGCTGGACGA ATATCGCGTG GGATCTGGAT CAGGCTTTCC AGCACCTGTC CCCCACCGCG CCGCTGGAAC GGCGACCGGG CTGGAAATTC GCCATGGACG AGGCCAAGGC GGTGCGCATG CGCCTGTTCC TGCGCCTGTG GAAAGAAGCG CCCGAATTCA GGACTTGGTT CCTGCGATAC GTGGTCGATG CCCTGAACCA CACGCTACGT CCCTCCGAAC TCAAGCGCAT GATCGCCCCG TATGTGGCGA TGGAACGACA ACTGGGACGC GAGATGTTCG ACCAGGATAC GGCAGCGGCG ATGCTTGCGG CCCGCCCCGT GCAAGTCATG GAAGAAACCG TGCGCGACCT TGGCGCACCG GCATGGTCCG CCGTGCACGT CAGTTCGTCC TGCCCGATTC GCATCGACGA CATGGCCGAC TACACCGAGT ACACGGGGCG CTATTTCATG GGCCAGACCG TGCGCCTGCA TGCCACGTCG CAGGATGGCA AGCCTTTTTC GCACTGGGAG GTAAACGGAG TGCGGCACGG CGGCCCGGAT ATGGAACTGA CCGTCGAAGG TGCCACAACC ATCCGCGCCG TGTTCAGCGA TATCTGA
|
Protein sequence | MSISTTRPNS PPQGDGTAAP SGPPRVPHGP GAPRIPLWAA ALFVAALLCA GLLLERSSFV RQYRAVSLHI ATGKDSLGSP RKRQLLAELG LPDVHTVAPE HRDHVERLLG EARADISPAL IASGWPVVAI RTDEENLSDP EIGIVANPEE RGIAWEHLSS MVYYRDGEER LATGAGLRIH GGGSRKDGIS FRLYFRNSYG QSPIPADMFF PGAEGSLKRI VLRKEKTPRP GFVCMLGFDV MARLGAQVPH FVPAIYLVNG KEMGISLLCE HISVKGWHRK LGHGNFLLYN IRKSNERKEF AALRELYLWA RLMPAPLTMR QVERRMDLRS MCAIIFGSVY LGANDWDQGA FLLDKTQPDP RWTNIAWDLD QAFQHLSPTA PLERRPGWKF AMDEAKAVRM RLFLRLWKEA PEFRTWFLRY VVDALNHTLR PSELKRMIAP YVAMERQLGR EMFDQDTAAA MLAARPVQVM EETVRDLGAP AWSAVHVSSS CPIRIDDMAD YTEYTGRYFM GQTVRLHATS QDGKPFSHWE VNGVRHGGPD MELTVEGATT IRAVFSDI
|
| |