Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_3010 |
Symbol | |
ID | 7174954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3796862 |
End bp | 3798667 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643541545 |
Product | sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002437415 |
Protein GI | 218888094 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 101 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCCA TGTCTCCCCT CTCCCCTCCA TCCGGAGACA CCCCGTCCAG CCGACCGACG CCCGGTGCCA CGGAACCCAC CCTGGCCCAT TCGGTGCTCC AGCAGTTCGA CATCAGCCCG TTCCTGGACA TGATGCTCAA CGTGGCCCAG GAACGCACCG TGGAGGGGCT GCTGGAACTG ACACACCGCG TCAACCGGGG CACCCACGTC ATGTGCGGAT GCATCTGGTT CGTGGATGCG CCGCCCCCGG CATCCGGCAC CGCCTCCGGC CCCGGCGAGG GCGACCCTGT ACTGCGCCTG ATGACCGTGG CCGGGCACAC CACCACCCCG GTACGCGACT GGCGCCATAC AGAAGGCACC TATGCCATGG TGCCGCTGTC CGAACCGCTG GTGGGGCAGG TGGCCCTGCG CGGCGAGCCC ACGTGGGCGG CATCGCCCGA GGACTGGGCC CGGCCGGCCT GGGCCGTGGA CGAGTCCATC CACGCCTACG CCGCCTATCC GTTGCAGTTC AAGGGCAACA TGATCGGGGT CATGGCCGTG TTCTACGACC GGCCCATGCG CGGGGTGCTG GCCGACCTGA TGCTGCTGCA CCGCAAGATG CACAAGATTT TCGCCGACTC CCTGTCCGCC GCCGTGGTCA ACGCCCGCTC CTTCGAGGAA ATCCAGCACC TGCGCCGGGC GCTGGAACTG GAAAACGAGC ACCTGCGCGG CGAGGTGCGC CGTGCCCGCG CGCCGCACTC CATCGTGGGC GACAGCCCGC CCCTGCGCCG GGCCCTGGAA CAGGTGGACA TGGTGGCCCC CACCGACGCC ACCGTGCTGC TGCTGGGCGA ATCGGGCACC GGCAAGGAAC TGGTGGCCCA GGCCATCCAC GACCGCAGCC AGCGCGCCGC CGCGCCGTTA GTGCGGGTGA ACTGTTCCGC CATCCCGCGC GAACTGTTCG AAAGCGAATT CTTCGGCCAT GTGAAGGGCG CCTTCACCGG TGCCCTGCGC GACCGGGTGG GCCGCTTTCA ACTGGCCGAC GGCGGCACCC TGTTTCTGGA CGAAGTGGGA GAAATACCCC TGGAATTGCA GGGAAAGCTG TTGCGCGTGC TGCAAGAGGG GGTGTTCGAG CGGGTGGGCG AGGAACGCAG CCGCAGCGTG GACGTGCGCA TCATCGCCGC CACCAACCGC GACCTGCGGG CCGACGTGGA GCATGGGCGC TTCCGGCAGG ACCTGTTCTT CCGGCTCAGC GTGTTCCCGG TGGCCCTGCC GCCCCTGCGC GCCCGGCGTG ATGACATCCC CCTGCTGGCC CGGCACTTCG TGCGGGCCTC GTGCCGCCGC CTGAACCTGC CGGAGCCGCG CATCGCCCAC CGCCAGATGG CCGAACTGCA ATCCTACCCC TGGCCGGGCA ACGTGCGCGA ATTGCAGAAC GTCATCGAGC GCGGGGTGAT CATGGCCGAA GGGGGACGGC TGGTGCTGGA TCTGCCGCCG GAAGGCGGGA TGCAGGCCGT GTCCCCCGGC GCCGCGTTCG GCATGCCGGG TGGCGCGAGC CCCGTGGAGG GGGGCGGCGC CCACGACGCG CCCTGGGGAA CGGGTGAAAC AGGAAGCGCC GGAAAAACCG CGGATTTCGG GCAAACGGGC GCACCGGACC CCGCCGGGAT CATTTCCGAA GCACACTGGC GCGAATTGCA GCGCGCCAAC ATCGAACGCG CCCTTACGGC GGCGGGCGGG CGCGTGCATG GTCCCGGCGG CGCGGCGGAA CTGCTGGGCC TGCCGCCCAC CACCCTGCAA TCGCGCATGA AGACACTGGG GTTGCGCGGG CGCTGA
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Protein sequence | MPPMSPLSPP SGDTPSSRPT PGATEPTLAH SVLQQFDISP FLDMMLNVAQ ERTVEGLLEL THRVNRGTHV MCGCIWFVDA PPPASGTASG PGEGDPVLRL MTVAGHTTTP VRDWRHTEGT YAMVPLSEPL VGQVALRGEP TWAASPEDWA RPAWAVDESI HAYAAYPLQF KGNMIGVMAV FYDRPMRGVL ADLMLLHRKM HKIFADSLSA AVVNARSFEE IQHLRRALEL ENEHLRGEVR RARAPHSIVG DSPPLRRALE QVDMVAPTDA TVLLLGESGT GKELVAQAIH DRSQRAAAPL VRVNCSAIPR ELFESEFFGH VKGAFTGALR DRVGRFQLAD GGTLFLDEVG EIPLELQGKL LRVLQEGVFE RVGEERSRSV DVRIIAATNR DLRADVEHGR FRQDLFFRLS VFPVALPPLR ARRDDIPLLA RHFVRASCRR LNLPEPRIAH RQMAELQSYP WPGNVRELQN VIERGVIMAE GGRLVLDLPP EGGMQAVSPG AAFGMPGGAS PVEGGGAHDA PWGTGETGSA GKTADFGQTG APDPAGIISE AHWRELQRAN IERALTAAGG RVHGPGGAAE LLGLPPTTLQ SRMKTLGLRG R
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