| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3003 |
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| Symbol | |
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| ID | 7174947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3790053 |
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| End bp | 3791237 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643541538 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_002437408 |
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| Protein GI | 218888087 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTTG CCCAGCGCAT GGAAAGTGTG CCCCGTTCCT ACATCCGCGA AATCCTGAAG
GTGACGGCGC AACCGGACAT CATTTCCTTT GCAGGGGGGC TGCCGCACCC GGCGTCGTTC
CCGGTGGACG CGGTGGCCAG CGCGGCGGCC AGCGTGCTGG AGGAAGCCGG GCCGGAAGCC
CTGCAATACA CCACCACCGA GGGCTTTCCG CCTCTGCGCC AGTGGATTGC CGACCGCTAC
AAGCGGCAGG GCATCAATGT CTCGCCCGAC GACATCCTGA TCACCACCGG CTCGCAGCAG
GCCCTGGACC TGGTGGCCAA GGCGTGCATC GACCGGGGCG GCAGGGTGGT CATGGAGCGT
CCCGGCTACC TGGGGGCCAT CCAGTGCTTC TCGGTGTTCG GCCCGGACTT CGTCACCGTG
CCCCTGACCC CGCGCGGGGT GGATACGGAT GCCTTGCGCA AGGCTGCCAC GGGTGCGCAG
GTGTTCTACG CCGTGCCCAG CTTCCAGAAT CCGTCCGGCA TCACCTATGA CGAGCAGACC
CGCCGCGAGG TGGCCGAGAT CATGGCCGAA ACCGGCTGCC TGATGGTGGA GGACAACCCC
TACGGCGAAC TGCGCTTCAT GGGGCAGCAC CTGCCGCCGG TGCGGGCGTA CATGCAGGCC
CCCTCGGTGC TGCTGGGCTC GTTCTCCAAG GTGGTGTCGC CGGGCCTGCG CCTGGGCTGG
GTGTGCGCGC CCCAGGAGGT GCTGAACCCC ATGATCACCG CCAAGCAGGC CAGCGACCTG
CACACACCCG GCTTTACCCA GCGCATCCTG CACCGCTATC TCATGGACAA TGACGTGGAC
AAGCACATCG CTTCCATCCG CGCCCGCTAC GGCGCCCAGC GCGACGCCAT GGTGCAGGCC
ATCCGCCGGC ACTTTCCCGA GGACGTGGCC TGCACCGAGC CGGAAGGCGG CATGTTCCTG
TGGTGTACCC TGCCCGAGGG CATTTCCGCC GAGGCGCTGT TCCACAAGGC CATCGAGCGC
AAGGTGGCCT TCGTGCCGGG GCGTCCGTTC TACGTGGACG AGACCGACGA CACCTTCCGC
CTCAACTTCT CCAACTCCAG CCCGGAACTG ATCGAAGAGG GCATCGCGCG CCTTGGGCAG
TGCCTGCGCG AGTATCTGGG CAAGGGGCAG GCAGGCGCGG CGTAG
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| Protein sequence | MRLAQRMESV PRSYIREILK VTAQPDIISF AGGLPHPASF PVDAVASAAA SVLEEAGPEA
LQYTTTEGFP PLRQWIADRY KRQGINVSPD DILITTGSQQ ALDLVAKACI DRGGRVVMER
PGYLGAIQCF SVFGPDFVTV PLTPRGVDTD ALRKAATGAQ VFYAVPSFQN PSGITYDEQT
RREVAEIMAE TGCLMVEDNP YGELRFMGQH LPPVRAYMQA PSVLLGSFSK VVSPGLRLGW
VCAPQEVLNP MITAKQASDL HTPGFTQRIL HRYLMDNDVD KHIASIRARY GAQRDAMVQA
IRRHFPEDVA CTEPEGGMFL WCTLPEGISA EALFHKAIER KVAFVPGRPF YVDETDDTFR
LNFSNSSPEL IEEGIARLGQ CLREYLGKGQ AGAA
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