Gene DvMF_3000 details

Gene Information

• Locus tag: DvMF_3000
• Symbol: fabZ
• ID: 7174944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 3787639
• End bp: 3788103
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643541535
• Product: (3R)-hydroxymyristoyl-ACP dehydratase
• Protein accession: YP_002437405
• Protein GI: 218888084
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 111
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGACC CCGCACAGAA CATCCTCGAT ATCCGCCAGA TTCTGGGCCT TTTGCCCCAT 
CGCTATCCCT TCCTGCTGGT GGACAGGGTG ACGGAATACG TCCCCGGCGA GTACATCAAG 
GGATACAAGA ACGTGACCAT GAACGAGCCG TTCTTCGAGG GGCACTTTCC CGGCGTGCCC 
GTGATGCCGG GCGTGCTGAT CATGGAAGCC TTGGCCCAGG CCGGTGGCAT CCTGGTGGTC 
AAGAGCACCG ACACCCCCGT TGAGGACAAG CTGTTCCTGT TCACCGGCAT CGAATCGGTG 
CGCTTCCGCA AGCCGGTCTA CCCCGGCGAC AAGCTGGAGC TGCACTGCCG CCTGCTGCGC 
CACAAGCTGA AGCTGTGGAA GATGGAAGGC TTCGCCTACG TGGACGGCAA GCTGGCCGCC 
GAAGCGGTGA TGACCGCCGC CGTGACCAAC AGGGAGGACA TGTAG 

 

Protein sequence

MTDPAQNILD IRQILGLLPH RYPFLLVDRV TEYVPGEYIK GYKNVTMNEP FFEGHFPGVP 
VMPGVLIMEA LAQAGGILVV KSTDTPVEDK LFLFTGIESV RFRKPVYPGD KLELHCRLLR 
HKLKLWKMEG FAYVDGKLAA EAVMTAAVTN REDM