Gene DvMF_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2997 
Symbol 
ID7174941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3783460 
End bp3785829 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content70% 
IMG OID643541532 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_002437402 
Protein GI218888081 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGT TTTTCGCCCT CCTTCTGCTT TCCCTCACAT TCGTTTGCTG CATTGGCCTT 
TCCGCACCGG CGAAGGCCGC CGATGCCGCG TCCGCATATG CCACCGCCAA GAAAGAGCTG
GAGTCCCTGA AGCGGGACTC CAGGCGCGGC GCGCTGCGCG AACCGTGGGA ACGCGTGGTG
TCCCGCTTCG ACGGCGTGGT CCGCGAGCAT CCGCGCTGGC CCAACGTGCC CGCCGCCATG
TTTCACGGCG CGCTGGCCAA GAAGGAACTG GCCAGCCGTT CGTTCCGCAC GGCAGACTTC
GAGGATGCCG CCCGCCGTTT CGAGCGGGTG GCCGCCACAT ACGGCTGGCA CGTGCTGGCC
GACGACGCGC TGCTGCACGC GGCGGACATC CGGGGCAACC GGCTTGGCGA TGTCGCTGCC
TCCCGCAAGC TGCTGGACTC CATCCTGACC CGCTATCCCA GCGGCGACAT GGCCGAACCC
GCCCGCGATC TGCTGGCTGC GCTTTCCGGC GCGCCCGGCG GCGATGCGCC CAAGGCGCCG
GTGGTCGTTG GCCGGTCTGG CCGTCTGGAG CAGGACGACG ACGCGCCCGC CTCGGCGGCG
GGTGATTCCG CACGATCTGC GGGCGGCGGG GTGGCGGTGG CCTCTGCCTC GGACGGCGTT
CCCGCTCCCA AAGCGCCGGC CAAGGCAAAA AAAGGCGCGC GCAGCGACCC GGCCAAGGCC
GCGAAGCTGT ACGCAGAGGC CCGCAAGGAA CTGGAGGCCG TGCGCGGCGA CGCCAGGCGC
GCCGCCCTGC GCGAACCGTG GCTGCGCGTG ATGGCCCTGT ACGAGGGCGC GCGGGATGCC
GCGCCGGAAG GTGAACTGGC CCCCAACGCC GCCTACGGCA TGGCCGTGGC GCAGGAGGAA
CTGGCCGCGC GCTCGTGGCG CAAGGACGAT TTCCTCGCGG CTGTGGCCCG CTACAATGAC
GTGGTGTCCG CCTACCCCGA AGATTCGCTG GCCGACGACT GCATGCTGCG CGCCGCGCGG
CTGCGGGCCA CCCGCCTGGA CGACGCGGAG GGGGCGCACC AGCTGCTGGA AGCGCAACTG
CGCCGCTACC CCAAGGGCGA CATGGCCGGA GAGGCCCGCG CCCTGCTGGC GGACCTGACC
GCCGCGCGCG TAACGGTATC TGCCCAGCCG GGGAAGGCGG CGGCTCCTGC CGTTTCCGCT
TCGCCCGCGT CACCGGCGCC CGCGCGCGGC GGCAAGCCCG CCGTGCTGCG TCAGGTGTCG
TGGCGGGCTG ACAACGACCG GGCCACCATC ACCATCGAAC TTTCGCGCGA GACGGAATGG
CGCAGCCAGT ATGCCGCGCC GGACAACGGC GCAGGCCGCC CGCCGCGCCT GTACATCGAC
TTTTCCGATG CCCTGCCCGA CGACGCGGTG AAGCCCGGCG CCAAGGTGTC CGGCGCGTTG
CTGACGCGGG TTCGTTCAGA CCAGCCCTCG TCCGGCCACA CCCGGGTCAT CCTGGATTTC
AAGGCGCTCC GGCGGTACAA GGTGCAGGCC GTGCGCAACC CGTACCGGGT GGTCATAGAG
GTGGGCGCCA CGGACGCGGC CCTGCCCGAT GGCCAGCGTC CCGACGATTC GCGGGTGTCC
GTGCCCGTGC GCGAGGCGGA CAAGGCCACG CCCTCCGTCC CTCCCAAGGA CCTGGTGGAA
CAGTTGGGCC TGACCGTGCA TACCGTGCTG ATCGATGCGG GCCACGGAGG CAAGGACCCC
GGCGCCATGG GCAACGGCAT CGTCGAGCGC AACCTGACCC TGAAGATGGC CAGAATGGTG
GGCGACCGCC TGCGCCGCAT GGGCTTTTCG GTCATCTACA CCCGCGACAG GGACGTGTTC
GTGCCGCTGG ACAAGCGCAC GGCCTACGCC AACGACAAGA AGGCCGACCT GTTCCTGTCG
CTGCACGTCA ACGCCAACAA CGACCCGCGC ATCTGCGGCT TCGAGACGTA CTACCTCGAC
CTTGCGCGAA CCGACAGCGC CACCCGCGTG GCCGCGCGCG AAAACGCCGT CAGCGAGAAA
AGCCTCAGCG ACCTGCAATT CATCCTCACC GACCTCATGC TCAACGCCAA GACCCAGGAA
TCGCGCGACG TGGCCAATTT CGTGCAGGAT TCGGCCCTGG GGCGGCTGCG GCGCGGCGGC
TTTCCCGCCC ATGACAACGG CGTGCGCTCT GCCCCGTTCT ACGTGCTGAT GGGCGCGCGC
ATGCCTTCGG TGCTGGTGGA ACTTGGCTAC TGCACGAACC CGGACGAGGC TCGCCGTCTG
AACTCGGACC AGTATCTCTC CACCCTGGCC GACGGCATTG CCGAGGGCGT GGCCACGTAC
AAGCGCAAAC TTGCCCGTTT TTCACAGTGA
 
Protein sequence
MHRFFALLLL SLTFVCCIGL SAPAKAADAA SAYATAKKEL ESLKRDSRRG ALREPWERVV 
SRFDGVVREH PRWPNVPAAM FHGALAKKEL ASRSFRTADF EDAARRFERV AATYGWHVLA
DDALLHAADI RGNRLGDVAA SRKLLDSILT RYPSGDMAEP ARDLLAALSG APGGDAPKAP
VVVGRSGRLE QDDDAPASAA GDSARSAGGG VAVASASDGV PAPKAPAKAK KGARSDPAKA
AKLYAEARKE LEAVRGDARR AALREPWLRV MALYEGARDA APEGELAPNA AYGMAVAQEE
LAARSWRKDD FLAAVARYND VVSAYPEDSL ADDCMLRAAR LRATRLDDAE GAHQLLEAQL
RRYPKGDMAG EARALLADLT AARVTVSAQP GKAAAPAVSA SPASPAPARG GKPAVLRQVS
WRADNDRATI TIELSRETEW RSQYAAPDNG AGRPPRLYID FSDALPDDAV KPGAKVSGAL
LTRVRSDQPS SGHTRVILDF KALRRYKVQA VRNPYRVVIE VGATDAALPD GQRPDDSRVS
VPVREADKAT PSVPPKDLVE QLGLTVHTVL IDAGHGGKDP GAMGNGIVER NLTLKMARMV
GDRLRRMGFS VIYTRDRDVF VPLDKRTAYA NDKKADLFLS LHVNANNDPR ICGFETYYLD
LARTDSATRV AARENAVSEK SLSDLQFILT DLMLNAKTQE SRDVANFVQD SALGRLRRGG
FPAHDNGVRS APFYVLMGAR MPSVLVELGY CTNPDEARRL NSDQYLSTLA DGIAEGVATY
KRKLARFSQ