Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2997 |
Symbol | |
ID | 7174941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3783460 |
End bp | 3785829 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643541532 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_002437402 |
Protein GI | 218888081 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 101 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACAGGT TTTTCGCCCT CCTTCTGCTT TCCCTCACAT TCGTTTGCTG CATTGGCCTT TCCGCACCGG CGAAGGCCGC CGATGCCGCG TCCGCATATG CCACCGCCAA GAAAGAGCTG GAGTCCCTGA AGCGGGACTC CAGGCGCGGC GCGCTGCGCG AACCGTGGGA ACGCGTGGTG TCCCGCTTCG ACGGCGTGGT CCGCGAGCAT CCGCGCTGGC CCAACGTGCC CGCCGCCATG TTTCACGGCG CGCTGGCCAA GAAGGAACTG GCCAGCCGTT CGTTCCGCAC GGCAGACTTC GAGGATGCCG CCCGCCGTTT CGAGCGGGTG GCCGCCACAT ACGGCTGGCA CGTGCTGGCC GACGACGCGC TGCTGCACGC GGCGGACATC CGGGGCAACC GGCTTGGCGA TGTCGCTGCC TCCCGCAAGC TGCTGGACTC CATCCTGACC CGCTATCCCA GCGGCGACAT GGCCGAACCC GCCCGCGATC TGCTGGCTGC GCTTTCCGGC GCGCCCGGCG GCGATGCGCC CAAGGCGCCG GTGGTCGTTG GCCGGTCTGG CCGTCTGGAG CAGGACGACG ACGCGCCCGC CTCGGCGGCG GGTGATTCCG CACGATCTGC GGGCGGCGGG GTGGCGGTGG CCTCTGCCTC GGACGGCGTT CCCGCTCCCA AAGCGCCGGC CAAGGCAAAA AAAGGCGCGC GCAGCGACCC GGCCAAGGCC GCGAAGCTGT ACGCAGAGGC CCGCAAGGAA CTGGAGGCCG TGCGCGGCGA CGCCAGGCGC GCCGCCCTGC GCGAACCGTG GCTGCGCGTG ATGGCCCTGT ACGAGGGCGC GCGGGATGCC GCGCCGGAAG GTGAACTGGC CCCCAACGCC GCCTACGGCA TGGCCGTGGC GCAGGAGGAA CTGGCCGCGC GCTCGTGGCG CAAGGACGAT TTCCTCGCGG CTGTGGCCCG CTACAATGAC GTGGTGTCCG CCTACCCCGA AGATTCGCTG GCCGACGACT GCATGCTGCG CGCCGCGCGG CTGCGGGCCA CCCGCCTGGA CGACGCGGAG GGGGCGCACC AGCTGCTGGA AGCGCAACTG CGCCGCTACC CCAAGGGCGA CATGGCCGGA GAGGCCCGCG CCCTGCTGGC GGACCTGACC GCCGCGCGCG TAACGGTATC TGCCCAGCCG GGGAAGGCGG CGGCTCCTGC CGTTTCCGCT TCGCCCGCGT CACCGGCGCC CGCGCGCGGC GGCAAGCCCG CCGTGCTGCG TCAGGTGTCG TGGCGGGCTG ACAACGACCG GGCCACCATC ACCATCGAAC TTTCGCGCGA GACGGAATGG CGCAGCCAGT ATGCCGCGCC GGACAACGGC GCAGGCCGCC CGCCGCGCCT GTACATCGAC TTTTCCGATG CCCTGCCCGA CGACGCGGTG AAGCCCGGCG CCAAGGTGTC CGGCGCGTTG CTGACGCGGG TTCGTTCAGA CCAGCCCTCG TCCGGCCACA CCCGGGTCAT CCTGGATTTC AAGGCGCTCC GGCGGTACAA GGTGCAGGCC GTGCGCAACC CGTACCGGGT GGTCATAGAG GTGGGCGCCA CGGACGCGGC CCTGCCCGAT GGCCAGCGTC CCGACGATTC GCGGGTGTCC GTGCCCGTGC GCGAGGCGGA CAAGGCCACG CCCTCCGTCC CTCCCAAGGA CCTGGTGGAA CAGTTGGGCC TGACCGTGCA TACCGTGCTG ATCGATGCGG GCCACGGAGG CAAGGACCCC GGCGCCATGG GCAACGGCAT CGTCGAGCGC AACCTGACCC TGAAGATGGC CAGAATGGTG GGCGACCGCC TGCGCCGCAT GGGCTTTTCG GTCATCTACA CCCGCGACAG GGACGTGTTC GTGCCGCTGG ACAAGCGCAC GGCCTACGCC AACGACAAGA AGGCCGACCT GTTCCTGTCG CTGCACGTCA ACGCCAACAA CGACCCGCGC ATCTGCGGCT TCGAGACGTA CTACCTCGAC CTTGCGCGAA CCGACAGCGC CACCCGCGTG GCCGCGCGCG AAAACGCCGT CAGCGAGAAA AGCCTCAGCG ACCTGCAATT CATCCTCACC GACCTCATGC TCAACGCCAA GACCCAGGAA TCGCGCGACG TGGCCAATTT CGTGCAGGAT TCGGCCCTGG GGCGGCTGCG GCGCGGCGGC TTTCCCGCCC ATGACAACGG CGTGCGCTCT GCCCCGTTCT ACGTGCTGAT GGGCGCGCGC ATGCCTTCGG TGCTGGTGGA ACTTGGCTAC TGCACGAACC CGGACGAGGC TCGCCGTCTG AACTCGGACC AGTATCTCTC CACCCTGGCC GACGGCATTG CCGAGGGCGT GGCCACGTAC AAGCGCAAAC TTGCCCGTTT TTCACAGTGA
|
Protein sequence | MHRFFALLLL SLTFVCCIGL SAPAKAADAA SAYATAKKEL ESLKRDSRRG ALREPWERVV SRFDGVVREH PRWPNVPAAM FHGALAKKEL ASRSFRTADF EDAARRFERV AATYGWHVLA DDALLHAADI RGNRLGDVAA SRKLLDSILT RYPSGDMAEP ARDLLAALSG APGGDAPKAP VVVGRSGRLE QDDDAPASAA GDSARSAGGG VAVASASDGV PAPKAPAKAK KGARSDPAKA AKLYAEARKE LEAVRGDARR AALREPWLRV MALYEGARDA APEGELAPNA AYGMAVAQEE LAARSWRKDD FLAAVARYND VVSAYPEDSL ADDCMLRAAR LRATRLDDAE GAHQLLEAQL RRYPKGDMAG EARALLADLT AARVTVSAQP GKAAAPAVSA SPASPAPARG GKPAVLRQVS WRADNDRATI TIELSRETEW RSQYAAPDNG AGRPPRLYID FSDALPDDAV KPGAKVSGAL LTRVRSDQPS SGHTRVILDF KALRRYKVQA VRNPYRVVIE VGATDAALPD GQRPDDSRVS VPVREADKAT PSVPPKDLVE QLGLTVHTVL IDAGHGGKDP GAMGNGIVER NLTLKMARMV GDRLRRMGFS VIYTRDRDVF VPLDKRTAYA NDKKADLFLS LHVNANNDPR ICGFETYYLD LARTDSATRV AARENAVSEK SLSDLQFILT DLMLNAKTQE SRDVANFVQD SALGRLRRGG FPAHDNGVRS APFYVLMGAR MPSVLVELGY CTNPDEARRL NSDQYLSTLA DGIAEGVATY KRKLARFSQ
|
| |