Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2996 |
Symbol | |
ID | 7174940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 3780366 |
End bp | 3783053 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643541531 |
Product | outer membrane protein assembly complex, YaeT protein |
Protein accession | YP_002437401 |
Protein GI | 218888080 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAC TCGCTAGATG GGGGCGCATC CTTGCGGTGG CCCTGCTTGT GCTCGCACAC GCGGCAACCT CTCCGGCCCA GACGCCGAGG GATACCACCG TCATTGTCCT GCCTTTCCAG GTGAATGCCG GACCGGACCT CGAATATCTC AACGACGACC TGCCGGAACT CATCTCGCAG CGCCTGGTGG CGCGCGGGCT TACCGTCATT GCCCGGCAGG ACACCCAGGC CCTGGTGCGC GACCAGCGCG TGACCAACCT GGACGTGTCC ACCGCGCGCG ACCTGTCGGT TCTGGCGGGC GCGGGCGTTG CCGTTTACGG CAGCTTCAAC CAGGTGGGCG AAGGCTTCAG CATCGACGTG CGCGTGGTGG ACGCCCTGGG CATCCGCGCC GCGCGCCCCT TCTTCATCCA GAAGGAAGGG CTGATCAACG TGCTGCCCGC CGTGGACGAA CTGGCCGAGC GCATCTCGTC CGACCTGCTG CGCCGCAACA CCCTGGCCGA CGTCAAGGTG CGCGGCACCA AGGTGCTGGA CCCCGACGTG GTGCTGATGC GCCTGACCAC CCGCAAGGGC GACCCGGTGG ATCCGGCCGC CATCAACCGC GAAGTGAAGC GCATCTGGGA TCTTGGCTAT TTCAGCGACG TGCAGGCCAA CGTGGAGCAG GACGGCGAAG GCCTGATCCT CGTGTACACG GTGCAGGAAA AGCCGCGCAT CGAAAACGTT ACCGTAGAGG GCTCGGACAA GGTGGACGTG GACGACATTC TTGCCGCCAT GAGCACCAAG ACCGGATCGG TCCTCAACGA AAAGCTGCTT GCGCAGGACC TGCAAAAGGT TACCGAACTC TACCGCAAGG AAGGCTACTA CCTGGCCAAG GTTTCGCACC GCGTCGATTC GCGCGCGGGC GGGGCGGGGG CCAGCCTGGT GCTGAAGGTG GAGGAAGGCA AGAAGCTGTA CATCAAGAAG GTGGCCTTCG AAGGTGTCGA AAAGCTGGAT GCCGACGACC TGAGGAAGCA GCTGGCGCTG TCCGAGCGCG GCATGTTCTC GTGGATTACC GGCTCCGGCG TGCTCAAGGA CGAACACCTC GAGCGCGATT CCGCCGCCAT CACCGCCTAC TGCATGAACC ACGGCTATCT CGACGCCATG GTGGCCGCGC CCAAGGTGGA CTACGAAGAG GATGGCATCA TCGTCACCTT CGCCATCAAG GAAGGCCCGC GCTACAAGCT GGGCGAAGTG ACCTTTGCGG GCGACCTCAT CGAGCCCGAC ACCCGCCTTG CCGAAATCAT CAAGCTGGAC GACGTGAAGA AGGAGGACGG GTTCTTCCGC TTCAACGTGA TGCAGGAAGA CAACAAGGCC CTGACCGATT TCTACGCGGA CTACGGCTAC GCCTTCGCCG AGGTGAACCC CCGCACCAAG AAGCACGAGG ACGAGCCCGT GGTGGACGTG GCCTACTCCG TGAACAAGCG GCAGAAGGTG TACATCCGGC GCGCCCTGGT GGAAGGCAAC GACAAGACCC GCGACAACGT CATCCTGCGT GAACTGCGCA TCACCGACGG CGACATGTTC GAGGGCAAGA AGCTGCGCCG CAGCGCGGAA CGCCTGAACA AGCTGCAGTA CTTCGAAGCC GTGAGCACGG AACTGGTGCC CACCGAGCGC GAAGAGGAAG TGGACCTGAA GGTCAAGGTG AAGGAGAAGA ACACCGGCGC GCTCATCGGC GGCATCGGGT ACTCCACCTA CTACGAGTTC GGCGTGTCCG GCACCATCAT GGAACGCAAC CTGTTCGGCA AGGGCTACCA GACCTCGCTG ATGGCCATGT TCTCCGGTCG CCGCACGGCG TACCAGTGGT CCTTCACCAA CCCGCGCTAC GACGACACCA ACCTGTCGGT GGGCTACGAC GCGTACAACA TCCGCGACGA GTACACGGAC TTCAGCAAGA ACACCATCGG CAACACCATC CGCTTCGCCT ACCCCATCGG CGAGTACACC ACCGTGGGCT GGGGGTACCG GCTCGACTTC TACAAGTTGT ACGACGTCAA CGAGGACGCG GCGAAGATCA TCCGCGAACG TGAAGGCGAC AACATATCCA GCGTCGCGCA CGGTCGCATC ACCCGCGACA CCACGGACAG CCGCGAAAAC CCGACCCGGG GCAATATCAC CAAGATATTC ACCGAATACG GCGGCGGCAT CCTGATGGGC GACGACAACT TCTTCAAGCC CACGGTGCAG ACCGAACAGT ACTACCAGTG GCGTCCCAAC CACGTGCTGC ACGGTCGCGT GCGCGGCGGC GTGGTGCTGG AAACCAGCGA CGAAGACGTG CCGGTGTTCG AACGCTTCTA CATCGGCGGC ATCGACTCCA TCCGCGGCTA CAGCTCCAAG GACATCTCCC CGCGCGACAA GGAATCCGGC GACCGCATCG GCGGCGACCG CATGGCCTTC GCCAACCTGG AATACATCTG GGTGTTCCAT CCCGAACTGG GCCTTGCCCT GGTGCCGTTC TTCGACGTGG GCTTCAACGC CGACTCCAGC GAGAAGTTCA CCTGGGACGA CGAGATCAAG AAGTCCGTGG GCCTCGAATT CCGGTGGCGC TCGCCCATGG GCGACCTGCG CTTCGCCTAC GGGATTCCGC TGGACGAAAA CCGCGAAGGC GAGAAGACCA ACGGGCGCTT CGAGTTCTCC ATGGGCCAGT TCTTCTAG
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Protein sequence | MTRLARWGRI LAVALLVLAH AATSPAQTPR DTTVIVLPFQ VNAGPDLEYL NDDLPELISQ RLVARGLTVI ARQDTQALVR DQRVTNLDVS TARDLSVLAG AGVAVYGSFN QVGEGFSIDV RVVDALGIRA ARPFFIQKEG LINVLPAVDE LAERISSDLL RRNTLADVKV RGTKVLDPDV VLMRLTTRKG DPVDPAAINR EVKRIWDLGY FSDVQANVEQ DGEGLILVYT VQEKPRIENV TVEGSDKVDV DDILAAMSTK TGSVLNEKLL AQDLQKVTEL YRKEGYYLAK VSHRVDSRAG GAGASLVLKV EEGKKLYIKK VAFEGVEKLD ADDLRKQLAL SERGMFSWIT GSGVLKDEHL ERDSAAITAY CMNHGYLDAM VAAPKVDYEE DGIIVTFAIK EGPRYKLGEV TFAGDLIEPD TRLAEIIKLD DVKKEDGFFR FNVMQEDNKA LTDFYADYGY AFAEVNPRTK KHEDEPVVDV AYSVNKRQKV YIRRALVEGN DKTRDNVILR ELRITDGDMF EGKKLRRSAE RLNKLQYFEA VSTELVPTER EEEVDLKVKV KEKNTGALIG GIGYSTYYEF GVSGTIMERN LFGKGYQTSL MAMFSGRRTA YQWSFTNPRY DDTNLSVGYD AYNIRDEYTD FSKNTIGNTI RFAYPIGEYT TVGWGYRLDF YKLYDVNEDA AKIIREREGD NISSVAHGRI TRDTTDSREN PTRGNITKIF TEYGGGILMG DDNFFKPTVQ TEQYYQWRPN HVLHGRVRGG VVLETSDEDV PVFERFYIGG IDSIRGYSSK DISPRDKESG DRIGGDRMAF ANLEYIWVFH PELGLALVPF FDVGFNADSS EKFTWDDEIK KSVGLEFRWR SPMGDLRFAY GIPLDENREG EKTNGRFEFS MGQFF
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