| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2986 |
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| Symbol | |
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| ID | 7174928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3762159 |
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| End bp | 3765845 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541519 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002437391 |
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| Protein GI | 218888070 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.387618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG ATGATGTCGA CGGGGCCGTT CAGCCCTGCC CCAACTCCCC GGATCATGCT
CCGGAACATG CTCCGGATTA CGCACCGGGG CATGCATCGG ACCGCACCTC CGTCACGTGG
TGCGGCCAAG CGGTGCCATG CGCCTCCACC GGCAAGCCTG CCGGTGTGCC CGGCAGTGTG
TCTGGCAGTG TGTCTGGCAA CGTGTCGGGC GCGGCGCCCC TGTCCGACGC CGGGCAGGAC
CGTCTGCGCC AGTTGGAGGA GGAGAACCGC CGCCTGCGCA TGGCGCTGGG GCTTCGCCCC
GACGATCCCG TGCCGTGCGG TACGCCCGCC CACCCCGGCA TCTCTGGCCC GTCTGGCATC
TCTGGCTTCA ACTTTTCTCC CGCTTCCACC CCGCCTGCTG ACGGCGGCAC CCGTTTTCCT
CCCCTGGCTC CTGGCAGTTG GGCAGGCAAC CTCCTTGCCC CGCGCGACGT GGCCGATCCC
CTCGTGGAAA TGGCCGCCCC GGCTGCGGAT GGCTTGGTCT GCGCCTACGT GTCCGACATC
GACACCCACG AGGTCCTGCA CGTCAACGCC GCCCTGCGCC GCCTTGTGGG CGACTGCGAG
GGCCGCCGCT GCCACGAGGC GTTGCAGGGC CGCGATGCCC CCTGTTCCTT CTGCAACAAT
GGCCGGTTGC GCGACGAGCC GGAAAAGGCC CACGTCTGGG AATTCCGCAA CCCGGCCCTG
AACCGCTGGT TCCGCTGCAT CGACAGGTTG GTGCCGCTGG GCAACGGGCG TTTGGCCCGG
TACGAACTGG CGGTGGACAT CACCGACATG AAGGAGACGG AAGAGGCCAT GCGCCGCTTC
CGCGCCGCGC TGGACGCCAC CGCCGAGGCC ATCTTTCTCA TCGATCCGGT GACCGGGCTG
CACGTGGACG TCAACCGGGG GGCCTGCGCC CTGCTGGGGC TTGCGCGCCA GCAGCTGCTG
TCCATGGGCC CCTGCGACAT CAACCCCACC CTTACCCGCG ACCGCTGCCT GGAAATCTCG
CGCACCGTGC TTGGCGGCAC GCCACTGCTG AACCAGGAAA CGCGCTATTG CCGGGGCGAC
GGCACCCTGG TGCCCGTGGA GCTCAGCACC AGCGCCTGGC ATTCCGCGAG GGGCGACCTC
ATCGTTGCGG TGGCGCGCGA CATTTCGGAA CGGGTGCGCG CCCGCAACGA AATGCAGCTG
CGCCTGCTGT ACGACCGGGT GCTGTCCACC TGCGCGCGCG ATCTGCTGGC GCGCCCCTGC
GCCGACGACA CGCTGCACGT GGTGCTGGAA AGCCTGCGCG AGGCCGCCGG GGCCTGCCGG
GTCTACATTT TCGAGAACCA CGACGACGCG CAAGGCAACC CGTGCTGTTC GCAGCGCTAC
GAGCGATGCG CGCCGGGCGT GCCGCCCCAG ATCGACAACC AGTTGCTGCG CAACGTGCCG
TACGCCACCG TCATTCCCCG CTGGGGGCAG GAACTGGAGG CGGGCCGGGT GATCCGGGGG
CCGGTGGCCT CCTTCCCCGA GTCGGAACGG GTGGTGCTGG AAGCGCAGGG CATCCGTTCG
CTGCTGGTGC TGCCCATCGT GGCGCAGGGG CGGTGGTACG GGTTCATCGG CTTTGACGAC
ACCCGCAGGC CCAGGGTCTG GGAATCGGTG GACCTCAAGT TTTTGCAGAC GGCGGGCGAG
ATCATCGGTG CCGCGCTGGA ACGCCGCCGG ACGGAACAGA CCCTGGCCGA ATCGGCGCGC
GGGCTGGAGG AAGCCAGCCG GGCCAAAAGC GAATTTCTGG CCAACATGAG CCACGAAATA
CGCACCCCGC TCAACGCCAT CATCGGCCTG ACCGAACTTT CGCTGCAAGA ACGCCTGCCC
GGCGACGTGG CCGAAAACCT GCGCGCGGCG CTGGTTTCGG CAGAGGCGCT GCTGGGCATC
GTCAACGATC TGCTGGACCT TTCGCGGGTG GAGGCGGGCA AGCTGCGCCT GGAGTGCATC
GACTTTGCCC CGGCGCGGCT GGTGCGCGGG GTGATGCGCG TCATGGGGCA CACGGCGGAA
CGCAAGGGCC TGTCCCTGAC CCTGCACATC GACCGCGACG TGCCCCGCCA TCTGCGTGGC
GACCCCGGCA GGCTGCGCCA GGTGCTGGTG AACTTCATCA GCAACGCCAT CAAGTTCACC
GACGAGGGTG GGGTGCATGT GGCGGTCTGC CGGTCGGACG GGCCCGATGC CGTCAATGCG
CCGGAAGCGT CAGGCATGGG CGGTGGCGTT ACCTGCGCCG AACCCCTTGC CTCCGGCACC
GTGTTTGGTG ATGCGTCATC CGGGCTGCAC ACGGACGGCG ACACGCAGTG GCTGTGCTTT
TCGGTGCGCG ATACGGGCAT CGGCATCCCG GACGACAAGC ACGAGCTGAT CTTCGAGAAT
TTCCGGCAGG CCGACGCCTC CACGGCGCGA CGCTACGGCG GTTCCGGCCT TGGCCTTGCC
ATCTGCCGCA AGTTCACGGA CATGATGGGG GGACGCATCG TGCTGGACAG CACGCCGGGG
CAGGGCAGCA CCTTTCGCGT GCTGTTGCCC TTCGGCACGT GCAAGGCGGA TGCTCCCTTC
GTGGCGTCGA ACGTGCGGCC TGATGCGGAT GCCCACGGGG TGTTCCAGGT GAAGGAGCGC
ACCCAGGGGG GCGAGTGGCA GGGCGGCGCA TCGGCAACGG CCCGCGTTAC CCCGGCAAGG
CCGCCCCTGC CGGGCACTCC GTCCGGGGCA CCCGCATCGC CCGGATTGGC GGAACTTCCC
GTGCTGTCCC GCCCTCCTGC CCGTCCGCCT GTGGGCTCTG CATTCCGCCA GACCGCCCGC
GATCCGTTGC GGGTCCTGCT GGTGGAATCG GACGACGTGA ACCGTCATGC GGTCAGCCGT
GCCCTGTCGC GCGGCGGGCA CCATCCCGTG ACGGCTGCCG CCGGGCGCGA GGCGCTGGAC
GCCGCCCGCA CGCAGCGCTT CGACCTGGTC ATCACCGACG CGCACCCGCG TGACATGGAC
GGAGCCGACG TGGTGCGCGC GTTGCGCCGC CTGGCCGATG CGGCCACCCC CTCCGACGTG
CCGGTGCTGC TCATGACCGG TGACCCCGCC GGAGTGGACC AGGGCGCCCT GGAGGCGGCG
GGCGGGGTGT CCGTGGCGTT GAAGCCGGTA CGGCTGAAGA CGTTGCTGGC CGCCGTGGAA
GGCATGGTGG GAGGATCCGG AGAGGATACC CTGCGCCGGT CGCCGCCCGC GCCGGTGGAC
GAACCCCCGG TGTTCAATGC CGCCACGCTG CTGGTGGGGG GCGACGAGGC CTCGTTGCGC
TTCCTGCGCC AGTCGGGCAC GCTGCGCGAA AGTCTGTGGT CGGCCATGGA CCGGGGCAGC
CGGGTGGAGC TCATCGCCCT GTCGCACCTG CTGCGCCTGG AGGCAGAGGC CATCGGCGCC
GAACGGGTGC GCCTGATGGC CGAGCGGATG GAATTGCGCA CCCGGTCCGC CGGGGCGGAA
GAAACGCGCC CGGTGTTCAT GCTGCTGATG GATGCCCTGA ACCAGCTGGA GCATGAACTG
CGCAAGATGC AGCGCGGCGC ACCGCCGATG GGCGAAAGTC CGGGTGGCGG ACAGGATGCC
GGGCCTGATG CCGAACAAGA TGCCGGGTCT GGCGCCGGGT CTGGCAAAGG ACCGGGGGAA
GGACCGGGCA CGGGCCAGAT GGCGTAG
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| Protein sequence | MRKDDVDGAV QPCPNSPDHA PEHAPDYAPG HASDRTSVTW CGQAVPCAST GKPAGVPGSV
SGSVSGNVSG AAPLSDAGQD RLRQLEEENR RLRMALGLRP DDPVPCGTPA HPGISGPSGI
SGFNFSPAST PPADGGTRFP PLAPGSWAGN LLAPRDVADP LVEMAAPAAD GLVCAYVSDI
DTHEVLHVNA ALRRLVGDCE GRRCHEALQG RDAPCSFCNN GRLRDEPEKA HVWEFRNPAL
NRWFRCIDRL VPLGNGRLAR YELAVDITDM KETEEAMRRF RAALDATAEA IFLIDPVTGL
HVDVNRGACA LLGLARQQLL SMGPCDINPT LTRDRCLEIS RTVLGGTPLL NQETRYCRGD
GTLVPVELST SAWHSARGDL IVAVARDISE RVRARNEMQL RLLYDRVLST CARDLLARPC
ADDTLHVVLE SLREAAGACR VYIFENHDDA QGNPCCSQRY ERCAPGVPPQ IDNQLLRNVP
YATVIPRWGQ ELEAGRVIRG PVASFPESER VVLEAQGIRS LLVLPIVAQG RWYGFIGFDD
TRRPRVWESV DLKFLQTAGE IIGAALERRR TEQTLAESAR GLEEASRAKS EFLANMSHEI
RTPLNAIIGL TELSLQERLP GDVAENLRAA LVSAEALLGI VNDLLDLSRV EAGKLRLECI
DFAPARLVRG VMRVMGHTAE RKGLSLTLHI DRDVPRHLRG DPGRLRQVLV NFISNAIKFT
DEGGVHVAVC RSDGPDAVNA PEASGMGGGV TCAEPLASGT VFGDASSGLH TDGDTQWLCF
SVRDTGIGIP DDKHELIFEN FRQADASTAR RYGGSGLGLA ICRKFTDMMG GRIVLDSTPG
QGSTFRVLLP FGTCKADAPF VASNVRPDAD AHGVFQVKER TQGGEWQGGA SATARVTPAR
PPLPGTPSGA PASPGLAELP VLSRPPARPP VGSAFRQTAR DPLRVLLVES DDVNRHAVSR
ALSRGGHHPV TAAAGREALD AARTQRFDLV ITDAHPRDMD GADVVRALRR LADAATPSDV
PVLLMTGDPA GVDQGALEAA GGVSVALKPV RLKTLLAAVE GMVGGSGEDT LRRSPPAPVD
EPPVFNAATL LVGGDEASLR FLRQSGTLRE SLWSAMDRGS RVELIALSHL LRLEAEAIGA
ERVRLMAERM ELRTRSAGAE ETRPVFMLLM DALNQLEHEL RKMQRGAPPM GESPGGGQDA
GPDAEQDAGS GAGSGKGPGE GPGTGQMA
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