| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2968 |
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| Symbol | |
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| ID | 7174910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3743181 |
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| End bp | 3744251 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643541501 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002437373 |
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| Protein GI | 218888052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 0.897922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA AGATGCTGTT GCTGCTGTCG ATGTTCACGG TGCTGCTGCT GCCCTGCCTG
GGCAATGCCG CGCCCAAGGA ATTCCGCCTG CTGACCTGGA AGGGGTACGC CCCGGCGGAG
CTGGTGGAAA AGTTCGAGAA GGAAACCGGC TACAAGGTGC AGGTGACCTA TTCGAACAAC
GAGGAAATGA TCGCCAAGCT GCGCGCCACG CGCGGCGGCG GGTTCGACCT TGCCCAGCCC
AGCCAGGACC GCATTTCTTC CGTGCAGGAA AGCTTCGGCC TGTACCAGCC CATCGACTTC
GGCCGCATCG AGGCAGCCCG GTTCATTCCC TCCATGCTCG ACGCGGTGAA GAAGAACACC
CTGGTCAAGG GCAAGTCGTA CGCCGTGCCG TTCTGCTGGG GCACCGACGG CCTGATCGTG
AACCGCAAGT TCGCCCCCGA TGCCAAAAGC TTCGCCGACC TGCTGGACGC CAAGTACGCG
GGCCGCGCCA GCTACCGCCT GAAGCGCCCC ACCCTCATCG CGCAGGCCTT CGGCATGGGC
ATCGACCCCT TCAAGCTGTA CGCCGATGAA GCCGCCTACC AGAAGATGCT GGACCAGGTG
GAAGGCAAGC TCATTGCCGC CAAGGGCGTG GTGAAGAACT ACTGGACCAA CGGCGACGCG
CTGCTGGAAT CCATGCGTTC GGGCGAAGTG CACATCGCCC AGGCCTGGGA CAACGGCGGC
TTCAAGCTGC ACGCGGAAAA CCCCGACATC GACTTTGTGG CGCCCACCAC CGGCGCGCTG
GGCTGGATCG ACACCTTCGC CATCCCCGCC AAGGCCGACA ACGCGGACGC CGCGTACAAG
TGGATCAACT TCATGATGCG GCCCGAAAAC GCGGCAGTGT TCACCAACGC CGAAGACACC
CCCACCGCCG CCGTGGGCGT GGGCGAACGC CTGAAGCCCA CCTTCCGCGC AGACTTCGAA
CGCTGCTACC CGCAGCAGGT CATCGACAAC ATCAAGTGGT ACCCGCCCGT GCCCGCCAAG
CTCGAAGCCA TGGAAGGCAA GGCGCTGGAC CGGGTGAAGG CCGCCCAGTA G
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| Protein sequence | MTKKMLLLLS MFTVLLLPCL GNAAPKEFRL LTWKGYAPAE LVEKFEKETG YKVQVTYSNN
EEMIAKLRAT RGGGFDLAQP SQDRISSVQE SFGLYQPIDF GRIEAARFIP SMLDAVKKNT
LVKGKSYAVP FCWGTDGLIV NRKFAPDAKS FADLLDAKYA GRASYRLKRP TLIAQAFGMG
IDPFKLYADE AAYQKMLDQV EGKLIAAKGV VKNYWTNGDA LLESMRSGEV HIAQAWDNGG
FKLHAENPDI DFVAPTTGAL GWIDTFAIPA KADNADAAYK WINFMMRPEN AAVFTNAEDT
PTAAVGVGER LKPTFRADFE RCYPQQVIDN IKWYPPVPAK LEAMEGKALD RVKAAQ
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