| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2953 |
|---|
| Symbol | |
|---|
| ID | 7174895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3725138 |
|---|
| End bp | 3726358 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643541486 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002437358 |
|---|
| Protein GI | 218888037 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.0879098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGGC TGCGCATTGC CCTGCGTTCG CTGGCGGCCC ACCGCATGCG CACGGTGCTG
GCCATGCTGG GGGTCTTTCT GGGCGCGCTG GCGCTTACCG CCGTGCTGCA CATCTCGAAG
GCCATGGTCA AAAAGGCCGA CATCGAGACG CAACGCCTTG GCCCCAACCT GTTGCAGGCC
CTGTCCGGGC AGGCCAACTT CCGGCGCGAA GGCTCCACCC GCGTCACCGG CATGACCACC
ACCTTCAGCC TGGAGGACGC CCGCGAAATA CTGGGCACCG TGCCCCAGGT GCGTCTGGGC
GTGCCGTATG CCAGCGGCTC CATGCCGGTG CGGTATGGCC GGGTGAAGAC GGGCAGCCAG
CTCATGGCAT CGCCCCCGGC CTACGCGCAG GTGCGCATGC TGGAAACCGA GCATGGCCGC
TTCTACAATG ACGAAGAAGA GGCCACGCAG GCCAAGGTGT GCGTGCTGGG CTATGCCATC
GCGCAGCGCC TGTTCGGTGA TACGGCGGAC GCCGTGGGCA AGCAGGTGTT CTTCTTTCGC
GCCAACGTGC TGGTGGTGGG CGTGCTGCCC GAAAAGGGCC AGGACGTGAC CGGCGCCAAC
CTGGACGAGA TGGTCTTCAC CCCGCTGTCC ACGTACATGC GCCGCTTCAC CAACCAGGAC
TGGATCAGCG GCGTGTTCAT GAACCTGCAC GACCAGAACG ACGAGGCCGT TGCCAAGGCC
ACCGTTACCG ACATACTGCG CCGCCGCCAC CACATGGGGC CAAGCCGCAA GGACGATTTT
TCGGTCATCT CGGCGCAGGA TTCCGCACGG CTGCGCAACC AGGCGCTGGA CCTGGTGTGG
ACGCTGGGCG TGCTGTCGTC GTCCATCTCG TTCGCCGTGG GGGCGCTGGG CATCCTGTCC
ATCATGATCC TGCTGGTGCG CGCCCGCAGG CTGGAGATCG GCATCCGCCG GGCCGTGGGC
GCCAGCCGCA CCGTGATCAT CCGCCAGTTT CTGGCCGAGG CCGGGGTGAT GGCCGGGGTG
GGCGGCGCGG CGGGGGTGCT GGCCGCGGTG GGTATTGTCA CCGTGGTGTA TGCCGTGGGG
GATTTTCCGT ACCTGTACGA CCCGCTACTG ATCGTGGGGG CCTGCGTGGC ATCGGTGCTG
CTGGGGTTGG TGGCCGGGGC GTACCCGGCG TGGCAGGCAT CGCGGGTGGA GGTGCTGGAG
GTGCTCAGGA ATCCTGAGTA G
|
|---|
| Protein sequence | MQRLRIALRS LAAHRMRTVL AMLGVFLGAL ALTAVLHISK AMVKKADIET QRLGPNLLQA
LSGQANFRRE GSTRVTGMTT TFSLEDAREI LGTVPQVRLG VPYASGSMPV RYGRVKTGSQ
LMASPPAYAQ VRMLETEHGR FYNDEEEATQ AKVCVLGYAI AQRLFGDTAD AVGKQVFFFR
ANVLVVGVLP EKGQDVTGAN LDEMVFTPLS TYMRRFTNQD WISGVFMNLH DQNDEAVAKA
TVTDILRRRH HMGPSRKDDF SVISAQDSAR LRNQALDLVW TLGVLSSSIS FAVGALGILS
IMILLVRARR LEIGIRRAVG ASRTVIIRQF LAEAGVMAGV GGAAGVLAAV GIVTVVYAVG
DFPYLYDPLL IVGACVASVL LGLVAGAYPA WQASRVEVLE VLRNPE
|
|---|
| |